* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘photobiology’ ...
** package ‘photobiology’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘photobiology’
finding HTML links ... done
A.illuminant.spct html
A2T html
Afr2T html
D2.UV653 html
D2_spectrum html
D65.illuminant.spct html
ET_ref html
FEL_spectrum html
Ler_leaf.spct html
MathFun html
Rfr_fraction html
Rfr_from_n html
Rfr_normdiff html
Rfr_ratio html
T2A html
T2Afr html
Tfr_fraction html
Tfr_normdiff html
Tfr_ratio html
Trig html
absorbance html
absorbance_spct html
absorptance html
absorptance_spct html
adaptive_smoothing html
add_attr2tb html
any2T html
as.calibration_mspct html
as.calibration_spct html
as.chroma_mspct html
as.chroma_spct html
as.cps_mspct html
as.cps_spct html
as.filter_mspct html
as.filter_spct html
as.generic_mspct html
as.generic_spct html
as.matrix-mspct html
as.object_mspct html
as.object_spct html
as.raw_mspct html
as.raw_spct html
as.reflector_mspct html
as.reflector_spct html
as.response_mspct html
as.response_spct html
as.solar_date html
as.solute_mspct html
as.solute_spct html
as.source_mspct html
as.source_spct html
as_energy html
as_quantum html
as_quantum_mol html
as_tod html
auto_hinges html
average_spct html
beesxyzCMF.spct html
black_body.spct html
c html
calc_multipliers html
calc_source_output html
ccd.spct html
checkMspctVersion html
checkSpctVersion html
checkTimeUnit html
check_and_rename_vars html
check_spct html
check_spectrum html
check_w.length html
ciev10.spct html
ciev2.spct html
ciexyzCC10.spct html
ciexyzCC2.spct html
ciexyzCMF10.spct html
ciexyzCMF2.spct html
class_spct html
clean html
clean_spct html
clear.spct html
clear_photobio.cache html
clip_wl html
collect2mspct html
color_of html
compare_spct html
cone_fundamentals10.spct html
convertTfrType html
convertThickness html
convertTimeUnit html
convolve_each html
copy_attributes html
cps2irrad html
day_night html
defunct html
despike html
diffraction_single_slit html
dim.generic_mspct html
div-.generic_spct html
div_spectra html
drop_user_cols html
e2q html
e2qmol_multipliers html
e2quantum_multipliers html
e_fluence html
e_fraction html
e_irrad html
e_ratio html
e_response html
enable_check_spct html
energy_as_default html
energy_irradiance html
energy_ratio html
eq_ratio html
expanse html
extract html
extract_mspct html
f_dispatcher_spct html
filter_cps.mspct html
findMultipleWl html
find_peaks html
find_spikes html
find_wls html
fit_peaks html
fluence html
format.solar_time html
format.tod_time html
formatted_range html
fscale html
fscale_spct html
fshift html
fshift_spct html
generic_mspct html
getFilterProperties html
getHowMeasured html
getIdFactor html
getInstrDesc html
getInstrSettings html
getKType html
getMspctVersion html
getMultipleWl html
getNormalized html
getScaled html
getSoluteProperties html
getSpctVersion html
getTimeUnit html
getWhatMeasured html
getWhenMeasured html
getWhereMeasured html
get_attributes html
get_peaks html
green_leaf.spct html
head_tail html
illuminance html
insert_hinges html
insert_spct_hinges html
integrate_spct html
integrate_xy html
interpolate_spct html
interpolate_spectrum html
interpolate_wl html
irrad html
irrad_extraterrestrial html
irradiance html
is.generic_mspct html
is.generic_spct html
is.old_spct html
is.solar_time html
is.summary_generic_spct html
is.waveband html
isValidInstrDesc html
isValidInstrSettings html
is_absorbance_based html
is_effective html
is_mole_based html
is_normalized html
is_photon_based html
is_scaled html
is_tagged html
join_mspct html
julian_day html
l_insert_hinges html
labels html
log html
make_var_labels html
make_wl_consistent html
max html
merge2object_spct html
merge_attributes html
midpoint html
min html
minus-.generic_spct html
mod-.generic_spct html
msmsply html
mspct_classes html
na.omit html
net_irradiance html
normalization html
normalize html
normalize_range_arg html
normalized_diff_ind html
oper_spectra html
peaks html
phenylalanine.spct html
photobiology-package html
photodiode.spct html
photon_irradiance html
photon_ratio html
photons_energy_ratio html
plus-.generic_spct html
pow-.generic_spct html
print.generic_spct html
print.metadata html
print.solar_time html
print.summary_generic_spct html
print.tod_time html
print.waveband html
prod_spectra html
pull_sample html
q2e html
q_fluence html
q_fraction html
q_irrad html
q_ratio html
q_response html
qe_ratio html
r4p_pkgs html
range html
rbindspct html
reflectance html
reflectance_spct html
relative_AM html
replace_bad_pixs html
resp_spct html
response html
rgb_spct html
rmDerivedMspct html
rmDerivedSpct html
round html
rowwise html
s_e_irrad2rgb html
s_mean html
s_mean_se html
s_mean_se_band html
s_median html
s_prod html
s_range html
s_sd html
s_se html
s_sum html
s_var html
se html
se.m html
se.p html
select_spct_attributes html
setBSWFUsed html
setFilterProperties html
setGenericSpct html
setHowMeasured html
setIdFactor html
setInstrDesc html
setInstrSettings html
setKType html
setMultipleWl html
setNormalized html
setResponseType html
setRfrType html
setScaled html
setSoluteProperties html
setTfrType html
setTimeUnit html
setWhatMeasured html
setWhenMeasured html
setWhereMeasured html
shared_member_class html
sign html
sinc html
slash-.generic_spct html
smooth_spct html
solar_time html
source_spct html
spct_attr2tb html
spct_classes html
spct_metadata html
spct_wide2long html
spikes html
split2mspct html
split_bands html
split_energy_irradiance html
split_irradiance html
split_photon_irradiance html
stepsize html
subset html
subset2mspct html
subset_attributes html
subt_spectra html
sum_spectra html
summary.generic_spct html
summary_spct_classes html
sun.spct html
sun_angles html
sun_daily.spct html
sun_evening.spct html
tag html
thin_wl html
times-.generic_spct html
transmittance html
transmittance_spct html
trimInstrDesc html
trimInstrSettings html
trim_spct html
trim_tails html
trim_waveband html
trim_wl html
twilight2angle html
two_filters.spct html
two_irrads html
two_reflectances html
two_transmittances html
tz_time_diff html
uncollect2spct html
untag html
upgrade_spct html
upgrade_spectra html
using_Tfr html
v_insert_hinges html
v_replace_hinges html
validate_geocode html
valleys html
verbose_as_default html
w_length2rgb html
w_length_range2rgb html
water.spct html
water_vp_sat html
waveband html
waveband_ratio html
wb2rect_spct html
wb2spct html
wb2tagged_spct html
wb_trim_as_default html
white_led.source_spct html
wl2wavenumber html
wls_at_target html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (photobiology)