* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘pepr’ ... ** package ‘pepr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘pepr’ finding HTML links ... done Config-class html Project-class html Project html activateAmendments html checkSection html config html dot-appendAttrs html dot-applyAmendments html dot-applyImports html dot-autoMergeDuplicatedNames html dot-checkSection html dot-deriveAttrs html dot-duplicateAttrs html dot-expandList html dot-expandPath html dot-getSampleTablePathFromConfig html dot-getSubSampleTablePathFromConfig html dot-getSubscript html dot-getTableIndexes html dot-implyAttrs html dot-inferProjectName html dot-isAbsolute html dot-isCfg html dot-isValidUrl html dot-listifyDF html dot-loadConfig html dot-loadSampleAnnotation html dot-loadSubsampleAnnotation html dot-makeAbsPath html dot-matchesAndRegexes html dot-mergeAttrs html dot-modifySamples html dot-printNestedList html dot-reformat html dot-removeAttrs html dot-safeFileExists html dot-strformat html fetchSamples html getSample html getSubsample html listAmendments html makeSectionsAbsolute html pepr html sampleTable html select-config html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pepr)