* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘oce’ ...
** package ‘oce’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-8) 14.2.0’
using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpi4vSpT/R.INSTALL22609a27ccc3e3/oce/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ad2cp_ahrs.cpp -o ad2cp_ahrs.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c adv_vector_time.cpp -o adv_vector_time.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c amsr.cpp -o amsr.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c approx.cpp -o approx.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c bilinear_interp.cpp -o bilinear_interp.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c binmap.c -o binmap.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bitwise.c -o bitwise.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coastline.c -o coastline.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c curl.cpp -o curl.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c echosounder.cpp -o echosounder.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fillgap1d.cpp -o fillgap1d.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fillgap2d.cpp -o fillgap2d.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gappy_index.cpp -o gappy_index.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c geod.cpp -o geod.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c get_bit.cpp -o get_bit.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gradient.cpp -o gradient.o
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c igrf12.f -o igrf12.o
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c igrf13.f -o igrf13.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c interp_barnes.cpp -o interp_barnes.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c landsat.cpp -o landsat.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ldc_ad2cp_in_file.cpp -o ldc_ad2cp_in_file.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ldc_rdi_in_buffer.c -o ldc_rdi_in_buffer.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ldc_rdi_in_file.cpp -o ldc_rdi_in_file.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ldc_rdi_in_file_new.cpp -o ldc_rdi_in_file_new.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c locate_byte_sequences.cpp -o locate_byte_sequences.o
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c magdec.f -o magdec.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c map.cpp -o map.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c map_old.c -o map_old.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c match_bytes.cpp -o match_bytes.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c matrix_smooth.cpp -o matrix_smooth.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c oce_approx.cpp -o oce_approx.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c oce_convolve.cpp -o oce_convolve.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c oce_filter.cpp -o oce_filter.o
gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c ocecp.f -o ocecp.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c registerDynamicSymbol.c -o registerDynamicSymbol.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c run.cpp -o run.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sfm_enu.cpp -o sfm_enu.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sontek_adp.cpp -o sontek_adp.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sontek_adv.cpp -o sontek_adv.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sw.c -o sw.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c time.cpp -o time.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c trap.cpp -o trap.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c trim.cpp -o trim.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o oce.so RcppExports.o ad2cp_ahrs.o adv_vector_time.o amsr.o approx.o bilinear_interp.o binmap.o bitwise.o coastline.o curl.o echosounder.o fillgap1d.o fillgap2d.o gappy_index.o geod.o get_bit.o gradient.o igrf12.o igrf13.o interp_barnes.o landsat.o ldc_ad2cp_in_file.o ldc_rdi_in_buffer.o ldc_rdi_in_file.o ldc_rdi_in_file_new.o locate_byte_sequences.o magdec.o map.o map_old.o match_bytes.o matrix_smooth.o oce_approx.o oce_convolve.o oce_filter.o ocecp.o registerDynamicSymbol.o run.o sfm_enu.o sontek_adp.o sontek_adv.o sw.o time.o trap.o trim.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpi4vSpT/R.INSTALL22609a27ccc3e3/oce/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpi4vSpT/R.INSTALL22609a27ccc3e3/oce/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpi4vSpT/R.INSTALL22609a27ccc3e3/oce/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-oce/00new/oce/libs
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘oce’
finding HTML links ... done
CTD_BCD2014666_008_1_DN.ODF.gz html
GMTOffsetFromTz html
ODF2oce html
ODFListFromHeader html
ODFNames2oceNames html
T68fromT90 html
T90fromT48 html
T90fromT68 html
abbreviateTimeLabels html
ad2cpCodeToName html
ad2cpHeaderValue html
addSpine html
adp-class html
adp html
adpAd2cpFileTrim html
adpConvertRawToNumeric html
adpEnsembleAverage html
adpFlagPastBoundary html
adpRdiFileTrim html
adp_rdi.000 html
adv-class html
adv html
advSontekAdrFileTrim html
airRho html
amsr-class html
amsr html
angle2hms html
angleRemap html
applyMagneticDeclination-adp-method html
applyMagneticDeclination-adv-method html
applyMagneticDeclination-cm-method html
applyMagneticDeclination-oce-method html
applyMagneticDeclination html
approx3d html
argShow html
argo-class html
argo html
argoGrid html
argoJuldToTime html
argoNames2oceNames html
as.adp html
as.argo html
as.cm html
as.coastline html
as.ctd html
as.echosounder html
as.gps html
as.ladp html
as.lisst html
as.lobo html
as.met html
as.oce html
as.rsk html
as.sealevel html
as.section html
as.tidem html
as.topo html
as.unit html
as.windrose html
as.xbt html
bcdToInteger html
beamName html
beamToXyz html
beamToXyzAdp html
beamToXyzAdpAD2CP html
beamToXyzAdv html
beamUnspreadAdp html
bilinearInterp html
binApply1D html
binApply2D html
binAverage html
binCount1D html
binCount2D html
binMean1D html
binMean2D html
binmapAdp html
bound125 html
bremen-class html
byteToBinary html
cm-class html
cm html
cnvName2oceName html
coastline-class html
coastlineBest html
coastlineCut html
coastlineWorld html
colormap html
colormapGMT html
composite-amsr-method html
composite-list-method html
composite html
computableWaterProperties html
concatenate-adp-method html
concatenate-list-method html
concatenate-oce-method html
concatenate html
coriolis html
ctd-class html
ctd html
ctd.cnv.gz html
ctdDecimate html
ctdFindProfiles html
ctdFindProfilesRBR html
ctdRaw html
ctdRepair html
ctdTrim html
ctd_aml.csv.gz html
ctimeToSeconds html
curl html
d200321-001.ctd.gz html
d201211_0011.cnv.gz html
dataLabel html
decimate html
decodeHeaderNortek html
decodeTime html
defaultFlags html
despike html
detrend html
download.amsr html
download.coastline html
download.met html
download.topo html
drawDirectionField html
drawIsopycnals html
drawPalette html
echosounder-class html
echosounder html
eclipticalToEquatorial html
enuToOther html
enuToOtherAdp html
enuToOtherAdv html
equatorialToLocalHorizontal html
errorbars html
fillGap html
fillGapMatrix html
findBottom html
firstFinite html
formatCI html
formatPosition html
fullFilename html
g1sst-class html
gappyIndex html
geodDist html
geodGc html
geodXy html
geodXyInverse html
gps-class html
grad html
gravity html
handleFlags-adp-method html
handleFlags-argo-method html
handleFlags-ctd-method html
handleFlags-oce-method html
handleFlags-section-method html
handleFlags-vector-method html
handleFlags html
handleFlagsInternal html
head.oce html
imagep html
initialize-ctd-method html
initializeFlagScheme-ctd-method html
initializeFlagScheme-oce-method html
initializeFlagScheme-section-method html
initializeFlagScheme html
initializeFlagSchemeInternal html
initializeFlags-adp-method html
initializeFlags-oce-method html
initializeFlags html
initializeFlagsInternal html
integerToAscii html
integrateTrapezoid html
interpBarnes html
is.ad2cp html
julianCenturyAnomaly html
julianDay html
labelWithUnit html
ladp-class html
landsat-class html
landsat html
landsatAdd html
landsatTrim html
latFormat html
latlonFormat html
lisst-class html
lisst html
lobo-class html
lobo html
locationForGsw html
lon360 html
lonFormat html
longitudeTighten html
lonlat2map html
lonlat2utm html
lookWithin html
lowpass html
magneticField html
makeFilter html
map2lonlat html
mapArrows html
mapAxis html
mapContour html
mapCoordinateSystem html
mapDirectionField html
mapGrid html
mapImage html
mapLines html
mapLocator html
mapLongitudeLatitudeXY html
mapPlot html
mapPoints html
mapPolygon html
mapScalebar html
mapText html
mapTissot html
matchBytes html
matrixShiftLongitude html
matrixSmooth html
met-class html
met html
metNames2oceNames html
moonAngle html
numberAsHMS html
numberAsPOSIXct html
oce-class html
oce-deprecated html
oce html
oce.as.raw html
oce.axis.POSIXct html
oce.contour html
oce.grid html
oce.plot.ts html
oce.write.table html
oceApprox html
oceAxis html
oceCRS html
oceColors9B html
oceColorsCDOM html
oceColorsChlorophyll html
oceColorsClosure html
oceColorsDensity html
oceColorsFreesurface html
oceColorsGebco html
oceColorsJet html
oceColorsOxygen html
oceColorsPAR html
oceColorsPalette html
oceColorsPhase html
oceColorsSalinity html
oceColorsTemperature html
oceColorsTurbidity html
oceColorsTurbo html
oceColorsTwo html
oceColorsVelocity html
oceColorsViridis html
oceColorsVorticity html
oceConvolve html
oceDebug html
oceDeleteData html
oceDeleteMetadata html
oceEdit html
oceFileTrim html
oceFilter html
oceGetData html
oceGetMetadata html
oceMagic html
oceNames2whpNames html
ocePmatch html
oceProject html
oceRenameData html
oceRenameMetadata html
oceSetData html
oceSetMetadata html
oceSmooth html
oceSpectrum html
oceUnits2whpUnits html
ocecolors html
odf-class html
parseLatLon html
plot-adp-method html
plot-adv-method html
plot-amsr-method html
plot-argo-method html
plot-bremen-method html
plot-cm-method html
plot-coastline-method html
plot-ctd-method html
plot-echosounder-method html
plot-gps-method html
plot-ladp-method html
plot-landsat-method html
plot-lisst-method html
plot-lobo-method html
plot-met-method html
plot-oce-method html
plot-odf-method html
plot-rsk-method html
plot-satellite-method html
plot-sealevel-method html
plot-section-method html
plot-tidem-method html
plot-topo-method html
plot-windrose-method html
plot-xbt-method html
plotInset html
plotPolar html
plotProfile html
plotScan html
plotSticks html
plotTS html
plotTaylor html
predict.tidem html
preferAdjusted html
presentTime html
prettyPosition html
processingLog-set html
processingLogAppend html
processingLogItem html
processingLogShow html
pwelch html
rangeExtended html
rangeLimit html
read.adp html
read.adp.ad2cp html
read.adp.nortek html
read.adp.rdi html
read.adp.sontek html
read.adp.sontek.serial html
read.adv html
read.adv.nortek html
read.adv.sontek.adr html
read.adv.sontek.serial html
read.adv.sontek.text html
read.amsr html
read.aquadopp html
read.aquadoppHR html
read.aquadoppProfiler html
read.argo html
read.argo.copernicus html
read.bremen html
read.cm html
read.coastline html
read.coastline.openstreetmap html
read.coastline.shapefile html
read.ctd html
read.ctd.aml html
read.ctd.itp html
read.ctd.odf html
read.ctd.odv html
read.ctd.saiv html
read.ctd.sbe html
read.ctd.ssda html
read.ctd.woce html
read.ctd.woce.other html
read.echosounder html
read.g1sst html
read.gps html
read.index html
read.landsat html
read.lisst html
read.lobo html
read.met html
read.netcdf html
read.oce html
read.odf html
read.rsk html
read.sealevel html
read.section html
read.topo html
read.woa html
read.xbt html
read.xbt.edf html
read.xbt.noaa1 html
rescale html
resizableLabel html
retime html
rotateAboutZ html
rsk-class html
rsk html
rsk2ctd html
rskPatm html
rskToc html
runlm html
satellite-class html
sealevel-class html
sealevel html
sealevelTuktoyaktuk html
secondsToCtime html
section-class html
section html
sectionAddStation html
sectionGrid html
sectionSmooth html
sectionSort html
setFlags-adp-method html
setFlags-ctd-method html
setFlags-oce-method html
setFlags html
shiftLongitude html
showMetadataItem html
siderealTime html
snakeToCamel html
standardDepths html
standardizeLongitude html
sub-sub-adp-method html
sub-sub-adv-method html
sub-sub-amsr-method html
sub-sub-argo-method html
sub-sub-bremen-method html
sub-sub-cm-method html
sub-sub-coastline-method html
sub-sub-ctd-method html
sub-sub-echosounder-method html
sub-sub-g1sst-method html
sub-sub-gps-method html
sub-sub-ladp-method html
sub-sub-landsat-method html
sub-sub-lisst-method html
sub-sub-lobo-method html
sub-sub-met-method html
sub-sub-oce-method html
sub-sub-odf-method html
sub-sub-rsk-method html
sub-sub-sealevel-method html
sub-sub-section-method html
sub-sub-tidem-method html
sub-sub-topo-method html
sub-sub-windrose-method html
sub-sub-xbt-method html
sub-subset-adp-method html
sub-subset-adv-method html
sub-subset-amsr-method html
sub-subset-argo-method html
sub-subset-bremen-method html
sub-subset-cm-method html
sub-subset-coastline-method html
sub-subset-ctd-method html
sub-subset-echosounder-method html
sub-subset-g1sst-method html
sub-subset-gps-method html
sub-subset-ladp-method html
sub-subset-landsat-method html
sub-subset-lisst-method html
sub-subset-lobo-method html
sub-subset-met-method html
sub-subset-oce-method html
sub-subset-odf-method html
sub-subset-rsk-method html
sub-subset-sealevel-method html
sub-subset-section-method html
sub-subset-tidem-method html
sub-subset-topo-method html
sub-subset-windrose-method html
sub-subset-xbt-method html
subset-adp-method html
subset-adv-method html
subset-amsr-method html
subset-argo-method html
subset-cm-method html
subset-coastline-method html
subset-ctd-method html
subset-echosounder-method html
subset-lobo-method html
subset-met-method html
subset-oce-method html
subset-odf-method html
subset-rsk-method html
subset-sealevel-method html
subset-section-method html
subset-topo-method html
subset-xbt-method html
subtractBottomVelocity html
summary-adp-method html
summary-adv-method html
summary-amsr-method html
summary-argo-method html
summary-bremen-method html
summary-cm-method html
summary-coastline-method html
summary-ctd-method html
summary-echosounder-method html
summary-gps-method html
summary-ladp-method html
summary-landsat-method html
summary-lisst-method html
summary-lobo-method html
summary-met-method html
summary-oce-method html
summary-odf-method html
summary-rsk-method html
summary-satellite-method html
summary-sealevel-method html
summary-section-method html
summary-tidem-method html
summary-topo-method html
summary-windrose-method html
summary-xbt-method html
sunAngle html
sunDeclinationRightAscension html
swAbsoluteSalinity html
swAlpha html
swAlphaOverBeta html
swBeta html
swCSTp html
swConservativeTemperature html
swDepth html
swDynamicHeight html
swLapseRate html
swN2 html
swPressure html
swRho html
swRrho html
swSCTp html
swSR html
swSTrho html
swSigma html
swSigma0 html
swSigma1 html
swSigma2 html
swSigma3 html
swSigma4 html
swSigmaT html
swSigmaTheta html
swSoundAbsorption html
swSoundSpeed html
swSpecificHeat html
swSpice html
swSpiciness0 html
swSpiciness1 html
swSpiciness2 html
swSstar html
swTFreeze html
swTSrho html
swThermalConductivity html
swTheta html
swViscosity html
swZ html
tail.oce html
threenum html
tidalCurrent html
tidedata html
tidem-class html
tidem html
tidemAstron html
tidemConstituentNameFix html
tidemVuf html
timeToArgoJuld html
titleCase html
toEnu html
toEnuAdp html
toEnuAdv html
topo-class html
topoInterpolate html
topoWorld html
unabbreviateYear html
undriftTime html
unduplicateNames html
ungrid html
unitFromString html
unitFromStringRsk html
unwrapAngle html
useHeading html
usrLonLat html
utm2lonlat html
vectorShow html
velocityStatistics html
webtide html
wind html
window.oce html
windrose-class html
woceNames2oceNames html
woceUnit2oceUnit html
write.ctd html
xbt-class html
xbt html
xbt.edf html
xyzToEnu html
xyzToEnuAdp html
xyzToEnuAdpAD2CP html
xyzToEnuAdv html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (oce)