* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘nodeSub’ ... ** package ‘nodeSub’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjB7UHO/R.INSTALL1c4b8674a2b96b/nodeSub/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c getP.cpp -o getP.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o nodeSub.so RcppExports.o getP.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjB7UHO/R.INSTALL1c4b8674a2b96b/nodeSub/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjB7UHO/R.INSTALL1c4b8674a2b96b/nodeSub/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjB7UHO/R.INSTALL1c4b8674a2b96b/nodeSub/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-nodeSub/00new/nodeSub/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘nodeSub’ finding HTML links ... done calc_expected_hidden_nodes html calc_fraction html calc_required_node_time html calc_sum_stats html count_hidden html create_balanced_tree html create_equal_alignment html create_equal_alignment_explicit html create_unbalanced_tree html estimate_marginal_models html get_p_matrix html infer_phylogeny html nodeSub-package html reduce_tree html sim_linked html sim_normal html sim_normal_explicit html sim_unlinked html sim_unlinked_explicit html slow_matrix html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nodeSub)