* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘nltm’ ... ** package ‘nltm’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp9njzfx/R.INSTALL285aeb3fce2e26/nltm/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -pedantic -mtune=native -c covariance.cc -o covariance.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -pedantic -mtune=native -c dmat.cc -o dmat.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -pedantic -mtune=native -c models.cc -o models.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c package_init.c -o package_init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -pedantic -mtune=native -c printVector.cc -o printVector.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -I. -fpic -g -O2 -Wall -pedantic -mtune=native -c profileLik.cc -o profileLik.o profileLik.cc: In function ‘void profileLik(double*, double*, double*, int*, int*, int*, double*, char**, int*, double*, int*, int*, int*, int*, int*, int*, double*)’: profileLik.cc:215:19: warning: ‘xx1’ may be used uninitialized [-Wmaybe-uninitialized] 215 | printDMatrix(xx1, nn, *nvar1); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ profileLik.cc:195:12: note: ‘xx1’ was declared here 195 | double **xx1, **xx2; | ^~~ profileLik.cc:219:19: warning: ‘xx2’ may be used uninitialized [-Wmaybe-uninitialized] 219 | printDMatrix(xx2, nn, *nvar2); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ profileLik.cc:195:19: note: ‘xx2’ was declared here 195 | double **xx1, **xx2; | ^~~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o nltm.so covariance.o dmat.o models.o package_init.o printVector.o profileLik.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp9njzfx/R.INSTALL285aeb3fce2e26/nltm/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp9njzfx/R.INSTALL285aeb3fce2e26/nltm/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp9njzfx/R.INSTALL285aeb3fce2e26/nltm/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-nltm/00new/nltm/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘nltm’ finding HTML links ... done anova.nltm html melanoma html nltm-internal html nltm html nltm.control html nltm.object html summary.nltm html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nltm)