* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘mstate’ ...
** package ‘mstate’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCbf7od/R.INSTALL21151d3415e84b/mstate/src'
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c agmssurv.c -o agmssurv.o
agmssurv.c: In function ‘agmssurv’:
agmssurv.c:63:20: warning: variable ‘H’ set but not used [-Wunused-but-set-variable]
63 | int n, p, var, H, K, nt, method;
| ^
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mstate_init.c -o mstate_init.o
gcc-14 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o mstate.so agmssurv.o mstate_init.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCbf7od/R.INSTALL21151d3415e84b/mstate/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCbf7od/R.INSTALL21151d3415e84b/mstate/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCbf7od/R.INSTALL21151d3415e84b/mstate/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-mstate/00new/mstate/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘mstate’
finding HTML links ... done
Cuminc html
EBMT-cause-of-death-data html
EBMT-data html
EBMT-platelet-recovery-data html
EBMT-year-of-relapse-data html
ELOS html
LMAJ html
Liver-cirrhosis-data html
MarkovTest html
aidssi html
bmt html
crprep.default html
cutLMms html
etm2msdata html
events html
expand.covs html
expand.covs.msdata html
haz_function html
modify_transMat html
msboot html
msboot.relsurv html
msboot.relsurv.boot html
msdata2etm html
msfit html
msfit.relsurv html
msprep html
mssample html
mstate-package html
paths html
plot.Cuminc html
plot.MarkovTest html
plot.msfit html
plot.probtrans html
print.MarkovTest html
print.msdata html
print.summary.msfit html
print.summary.probtrans html
probtrans html
redrank html
summary.Cuminc html
summary.msfit html
summary.probtrans html
trans2tra html
transMat html
transhelp html
varHaz.fixed html
vis.mirror.pt html
vis.multiple.pt html
xsect html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mstate)