* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘mirtjml’ ...
** package ‘mirtjml’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’
using C++11
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5vAx2i/R.INSTALL24c8f35f7a7233/mirtjml/src'
g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -DARMA_DONT_USE_OPENMP -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -DARMA_DONT_USE_OPENMP -fpic  -g -O2 -Wall -pedantic -mtune=native   -c cjmle_conf.cpp -o cjmle_conf.o
g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -DARMA_DONT_USE_OPENMP -fpic  -g -O2 -Wall -pedantic -mtune=native   -c cjmle_expr.cpp -o cjmle_expr.o
g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -DARMA_DONT_USE_OPENMP -fpic  -g -O2 -Wall -pedantic -mtune=native   -c depend_funcs.cpp -o depend_funcs.o
g++-14 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -DARMA_DONT_USE_OPENMP -fpic  -g -O2 -Wall -pedantic -mtune=native   -c openmp-utils.cpp -o openmp-utils.o
g++-14 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o mirtjml.so RcppExports.o cjmle_conf.o cjmle_expr.o depend_funcs.o openmp-utils.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -DARMA_DONT_USE_OPENMP -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5vAx2i/R.INSTALL24c8f35f7a7233/mirtjml/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5vAx2i/R.INSTALL24c8f35f7a7233/mirtjml/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5vAx2i/R.INSTALL24c8f35f7a7233/mirtjml/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-mirtjml/00new/mirtjml/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘mirtjml’
    finding HTML links ... done
    data_sim                                html  
    getMIRTthreads                          html  
    mirtjml_conf                            html  
    mirtjml_expr                            html  
    setMIRTthreads                          html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mirtjml)