* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘minimapR’ ...
** package ‘minimapR’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘minimapR’
    finding HTML links ... done
    minimap2                                html  
    minimap2_check                          html  
    minimap2_installation                   html  
    mm2_install                             html  
    samtools_check                          html  
    samtools_install                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (minimapR)