* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘metasnf’ ...
** package ‘metasnf’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘metasnf’
    finding HTML links ... done
    abcd_anxiety                            html  
    abcd_colour                             html  
    abcd_cort_sa                            html  
    abcd_cort_t                             html  
    abcd_depress                            html  
    abcd_h_income                           html  
    abcd_income                             html  
    abcd_pubertal                           html  
    abcd_subc_v                             html  
    add_columns                             html  
    add_settings_df_rows                    html  
    adjusted_rand_index_heatmap             html  
    age_df                                  html  
    alluvial_cluster_plot                   html  
    anxiety                                 html  
    arrange                                 html  
    arrange_dll                             html  
    as.data.frame.data_list                 html  
    as.data.frame.ext_solutions_df          html  
    as.data.frame.solutions_df              html  
    as_ari_matrix                           html  
    as_data_list                            html  
    as_settings_df                          html  
    as_sim_mats_list                        html  
    as_snf_config                           html  
    as_weights_matrix                       html  
    assemble_data                           html  
    assoc_pval_heatmap                      html  
    auto_plot                               html  
    bar_plot                                html  
    batch_row_closure                       html  
    batch_snf                               html  
    batch_snf_subsamples                    html  
    calc_aris                               html  
    calc_assoc_pval                         html  
    calc_assoc_pval_matrix                  html  
    calc_nmis                               html  
    calculate_coclustering                  html  
    cancer_diagnosis_df                     html  
    cat_colours                             html  
    cell_significance_fn                    html  
    char_to_fac                             html  
    check_cfll_fn_args                      html  
    check_cfll_fns                          html  
    check_cfll_named                        html  
    check_cfll_unique_names                 html  
    check_compatible_sdf_cfl                html  
    check_compatible_sdf_dfl                html  
    check_compatible_sdf_wm                 html  
    check_dataless_annotations              html  
    check_dfll_fn_args                      html  
    check_dfll_fn_names                     html  
    check_dfll_item_names                   html  
    check_dfll_subitems_are_fns             html  
    check_dfll_unique_names                 html  
    check_dll_duplicate_components          html  
    check_dll_duplicate_features            html  
    check_dll_empty_input                   html  
    check_dll_four_subitems                 html  
    check_dll_inherits_list                 html  
    check_dll_subitem_classes               html  
    check_dll_subitem_names                 html  
    check_dll_types                         html  
    check_dll_uid                           html  
    check_hm_dependencies                   html  
    check_sdfl_colnames                     html  
    check_sdfl_is_df                        html  
    check_sdfl_numeric                      html  
    check_similarity_matrices               html  
    check_valid_k                           html  
    check_valid_sc                          html  
    chi_squared_pval                        html  
    clust_fns                               html  
    clust_fns_list                          html  
    cocluster_density                       html  
    cocluster_heatmap                       html  
    coclustering_coverage_check             html  
    collapse_dl                             html  
    colour_scale                            html  
    config_heatmap                          html  
    convert_uids                            html  
    cort_sa                                 html  
    cort_t                                  html  
    data_list                               html  
    depress                                 html  
    diagnosis_df                            html  
    discretisation                          html  
    discretisation_evec_data                html  
    dist_fns                                html  
    dist_fns_list                           html  
    dl_variable_summary                     html  
    dlapply                                 html  
    dll_uid_first_col                       html  
    domains                                 html  
    drop_cols                               html  
    drop_inputs                             html  
    ensure_dll_df                           html  
    esm_manhattan_plot                      html  
    estimate_nclust_given_graph             html  
    expression_df                           html  
    ext_solutions_df                        html  
    extend_solutions                        html  
    fav_colour                              html  
    features                                html  
    fisher_exact_pval                       html  
    gender_df                               html  
    generate_annotations_list               html  
    generate_clust_algs_list                html  
    generate_distance_metrics_list          html  
    generate_settings_matrix                html  
    get_cluster_df                          html  
    get_cluster_solutions                   html  
    get_clusters                            html  
    get_complete_uids                       html  
    get_dist_matrix                         html  
    get_dl_uids                             html  
    get_heatmap_order                       html  
    get_matrix_order                        html  
    get_mean_pval                           html  
    get_min_pval                            html  
    get_pvals                               html  
    get_representative_solutions            html  
    gexclude                                html  
    gselect                                 html  
    income                                  html  
    is_data_list                            html  
    jitter_plot                             html  
    label_meta_clusters                     html  
    label_prop                              html  
    label_propagate                         html  
    label_splits                            html  
    linear_adjust                           html  
    linear_model_pval                       html  
    mc_manhattan_plot                       html  
    merge.snf_config                        html  
    merge_df_list                           html  
    merge_dls                               html  
    meta_cluster_heatmap                    html  
    metasnf-package                         html  
    metasnf_alert                           html  
    metasnf_defunct                         html  
    metasnf_deprecated                      html  
    metasnf_error                           html  
    metasnf_warning                         html  
    methylation_df                          html  
    n_features                              html  
    n_observations                          html  
    new_ari_matrix                          html  
    new_clust_fns_list                      html  
    new_data_list                           html  
    new_dist_fns_list                       html  
    new_ext_solutions_df                    html  
    new_settings_df                         html  
    new_sim_mats_list                       html  
    new_snf_config                          html  
    new_solutions_df                        html  
    new_weights_matrix                      html  
    not_shown_message                       html  
    numcol_to_numeric                       html  
    ord_reg_pval                            html  
    parallel_batch_snf                      html  
    pick_cols                               html  
    prefix_dll_uid                          html  
    print.ari_matrix                        html  
    print.clust_fns_list                    html  
    print.data_list                         html  
    print.dist_fns_list                     html  
    print.ext_solutions_df                  html  
    print.settings_df                       html  
    print.snf_config                        html  
    print.solutions_df                      html  
    print.t_ext_solutions_df                html  
    print.t_solutions_df                    html  
    print.weights_matrix                    html  
    print_with_n_message                    html  
    print_with_t_message                    html  
    pubertal                                html  
    pval_heatmap                            html  
    quality_measures                        html  
    random_removal                          html  
    rbind.ext_solutions_df                  html  
    rbind.solutions_df                      html  
    remove_dll_incomplete                   html  
    rename_dl                               html  
    reorder_dl_uids                         html  
    resample                                html  
    run_snf                                 html  
    save_heatmap                            html  
    scale_diagonals                         html  
    settings_df                             html  
    shiny_annotator                         html  
    sim_mats_list                           html  
    similarity_matrix_heatmap               html  
    similarity_matrix_path                  html  
    siw_euclidean_distance                  html  
    snf_config                              html  
    snf_scheme                              html  
    snf_step                                html  
    sol_df_col_order                        html  
    solutions_df                            html  
    split_parser                            html  
    subc_v                                  html  
    subsample_dl                            html  
    subsample_pairwise_aris                 html  
    summarize_clust_fns_list                html  
    summarize_dfl                           html  
    summarize_dl                            html  
    summarize_pvals                         html  
    summary.data_list                       html  
    summary_features                        html  
    train_test_assign                       html  
    uids                                    html  
    validate_ari_matrix                     html  
    validate_clust_fns_list                 html  
    validate_data_list                      html  
    validate_dist_fns_list                  html  
    validate_ext_solutions_df               html  
    validate_settings_df                    html  
    validate_sim_mats_list                  html  
    validate_snf_config                     html  
    validate_solutions_df                   html  
    validate_weights_matrix                 html  
    var_manhattan_plot                      html  
    weights_matrix                          html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (metasnf)