* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘lgcp’ ...
** package ‘lgcp’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for ‘raster’ with signature ‘"lgcpgrid"’: no definition for class “lgcpgrid”
** help
*** installing help indices
converting help for package ‘lgcp’
finding HTML links ... done
BetaParameters html
CovFunction html
CovFunction.function html
CovParameters html
CovarianceFct html
Cvb html
EvaluatePrior html
Extract.mstppp html
Extract.stppp html
GAfinalise.MonteCarloAverage html
GAfinalise html
GAfinalise.nullAverage html
GAinitialise.MonteCarloAverage html
GAinitialise html
GAinitialise.nullAverage html
GAreturnvalue.MonteCarloAverage html
GAreturnvalue html
GAreturnvalue.nullAverage html
GAupdate.MonteCarloAverage html
GAupdate html
GAupdate.nullAverage html
GFfinalise html
GFfinalise.dump2dir html
GFfinalise.nullFunction html
GFinitialise html
GFinitialise.dump2dir html
GFinitialise.nullFunction html
GFreturnvalue html
GFreturnvalue.dump2dir html
GFreturnvalue.nullFunction html
GFupdate html
GFupdate.dump2dir html
GFupdate.nullFunction html
GPdrv html
GPdrv2 html
GPdrv2_Multitype html
GPlist2array html
GPrealisation html
GammafromY html
GaussianPrior html
KinhomAverage html
LogGaussianPrior html
MALAlgcp html
MALAlgcpAggregateSpatial.PlusPars html
MALAlgcpMultitypeSpatial.PlusPars html
MALAlgcpSpatial.PlusPars html
MALAlgcpSpatial html
MALAlgcpSpatioTemporal.PlusPars html
MonteCarloAverage html
PriorSpec html
PriorSpec.list html
RandomFieldsCovFct html
SpatialPolygonsDataFrame.stapp html
SpikedExponentialCovFct html
YfromGamma html
add.list html
addTemporalCovariates html
affine.SpatialPolygonsDataFrame html
affine.fromFunction html
affine.fromSPDF html
affine.fromXYZ html
affine.stppp html
aggCovInfo.ArealWeightedMean html
aggCovInfo.ArealWeightedSum html
aggCovInfo.Majority html
aggCovInfo html
aggregateCovariateInfo html
aggregateformulaList html
andrieuthomsh html
as.SpatialGridDataFrame html
as.SpatialGridDataFrame.fromXYZ html
as.SpatialPixelsDataFrame html
as.SpatialPixelsDataFrame.lgcpgrid html
as.array.lgcpgrid html
as.fromXYZ html
as.fromXYZ.fromFunction html
as.im.fromFunction html
as.im.fromSPDF html
as.im.fromXYZ html
as.list.lgcpgrid html
as.owin.stapp html
as.owinlist html
as.owinlist.SpatialPolygonsDataFrame html
as.owinlist.stapp html
as.ppp.mstppp html
as.ppp.stppp html
as.stppp html
as.stppp.stapp html
assigninterp html
at html
autocorr html
autocorrMultitype html
betavals html
blockcircbase html
blockcircbaseFunction html
bt.scalar html
checkObsWin html
chooseCellwidth html
circulant html
circulant.matrix html
circulant.numeric html
clearinterp html
computeGradtruncSpatial html
computeGradtruncSpatioTemporal html
condProbs html
constantInTime html
constantInTime.numeric html
constantInTime.stppp html
constanth html
cov.interp.fft html
covEffects html
d.func html
density.stppp html
finding level-2 HTML links ... done
discreteWindow html
discreteWindow.lgcpPredict html
dot-onAttach html
dump2dir html
eigenfrombase html
etavals html
exceedProbs html
exceedProbsAggregated html
expectation html
expectation.lgcpPredict html
expectation.lgcpPredictSpatialOnlyPlusParameters
html
exponentialCovFct html
extendspatialAtRisk html
extract html
extract.lgcpPredict html
fftgrid html
fftinterpolate html
fftinterpolate.fromFunction html
fftinterpolate.fromSPDF html
fftinterpolate.fromXYZ html
fftmultiply html
formulaList html
gDisjoint_wg html
gIntersects_pg html
gOverlay html
gTouches_wg html
genFFTgrid html
getCellCounts html
getCounts html
getCovParameters.GPrealisation html
getCovParameters html
getCovParameters.list html
getLHSformulaList html
getRotation html
getRotation.default html
getRotation.stppp html
getZmat html
getZmats html
getinterp html
getlgcpPredictSpatialINLA html
getpolyol html
getup html
ginhomAverage html
grid2spdf html
grid2spix html
grid2spoly html
grid2spts html
gridInWindow html
gridav html
gridav.lgcpPredict html
gridfun html
gridfun.lgcpPredict html
gu html
guessinterp html
hasNext html
hasNext.iter html
hvals html
hvals.lgcpPredict html
identify.lgcpPredict html
identifygrid html
image.lgcpgrid html
initialiseAMCMC html
initialiseAMCMC.andrieuthomsh html
initialiseAMCMC.constanth html
integerise html
integerise.mstppp html
integerise.stppp html
intens html
intens.lgcpPredict html
intens.lgcpSimMultitypeSpatialPlusParameters
html
intens.lgcpSimSpatialPlusParameters html
interptypes html
inversebase html
is.SPD html
is.burnin html
is.pow2 html
is.retain html
iteration html
lambdaEst html
lambdaEst.ppp html
lambdaEst.stppp html
lgcp-package html
lgcpForecast html
lgcpInits html
lgcpPredict html
lgcpPredictAggregateSpatialPlusPars html
lgcpPredictAggregated html
lgcpPredictMultitypeSpatialPlusPars html
lgcpPredictSpatial html
lgcpPredictSpatialINLA html
lgcpPredictSpatialPlusPars html
lgcpPredictSpatioTemporalPlusPars html
lgcpPrior html
lgcpSim html
lgcpSimMultitypeSpatialCovariates html
lgcpSimSpatial html
lgcpSimSpatialCovariates html
lgcpbayes html
lgcpgrid html
lgcpgrid.array html
lgcpgrid.list html
lgcpgrid.matrix html
lgcppars html
lgcpvignette html
loc2poly html
loop.mcmc html
ltar html
matchcovariance html
maternCovFct15 html
maternCovFct25 html
mcmcLoop html
mcmcProgressNone html
mcmcProgressPrint html
mcmcProgressTextBar html
mcmcProgressTk html
mcmcpars html
mcmctrace html
mcmctrace.lgcpPredict html
meanfield html
meanfield.lgcpPredict html
meanfield.lgcpPredictINLA html
mstppp html
mstppp.list html
mstppp.ppp html
mstppp.stppp html
muEst html
multiply.list html
neattable html
neigh2D html
nextStep html
nullAverage html
nullFunction html
numCases html
osppp2latlon html
osppp2merc html
paramprec html
paramprecbase html
parautocorr html
parsummary html
plot.fromSPDF html
plot.fromXYZ html
plot.lgcpAutocorr html
plot.lgcpPredict html
plot.lgcpQuantiles html
plot.lgcpZmat html
plot.lgcpgrid html
plot.mcmcdiag html
plot.mstppp html
plot.stppp html
plot.temporalAtRisk html
plotExceed html
plotExceed.array html
plotExceed.lgcpPredict html
plotit html
postcov html
postcov.lgcpPredictAggregateSpatialPlusParameters
html
postcov.lgcpPredictMultitypeSpatialPlusParameters
html
postcov.lgcpPredictSpatialOnlyPlusParameters
html
postcov.lgcpPredictSpatioTemporalPlusParameters
html
print.dump2dir html
print.fromFunction html
print.fromSPDF html
print.fromXYZ html
print.gridaverage html
print.lgcpPredict html
print.lgcpgrid html
print.mcmc html
print.mstppp html
print.stapp html
print.stppp html
print.temporalAtRisk html
priorpost html
quantile.lgcpPredict html
quantile.lgcpgrid html
raster.lgcpgrid html
rescale.mstppp html
rescale.stppp html
resetLoop html
rgauss html
roteffgain html
rotmat html
rr html
rr.lgcpPredict html
samplePosterior html
segProbs html
seintens html
seintens.lgcpPredict html
selectObsWindow html
selectObsWindow.default html
selectObsWindow.stppp html
serr html
serr.lgcpPredict html
setTxtProgressBar2 html
setoutput html
showGrid html
showGrid.default html
showGrid.lgcpPredict html
showGrid.stppp html
smultiply.list html
sparsebase html
spatialAtRisk html
spatialAtRisk.SpatialGridDataFrame html
spatialAtRisk.SpatialPolygonsDataFrame
html
spatialAtRisk.bivden html
spatialAtRisk.default html
spatialAtRisk.fromXYZ html
spatialAtRisk.function html
spatialAtRisk.im html
spatialAtRisk.lgcpgrid html
spatialIntensities html
spatialIntensities.fromSPDF html
spatialIntensities.fromXYZ html
spatialparsEst html
stGPrealisation html
stapp html
stapp.SpatialPolygonsDataFrame html
stapp.list html
stppp html
stppp.list html
stppp.ppp html
summary.lgcpgrid html
summary.mcmc html
target.and.grad.AggregateSpatialPlusPars
html
target.and.grad.MultitypespatialPlusPars
html
target.and.grad.SpatioTemporalPlusPars
html
target.and.grad.spatial html
target.and.grad.spatialPlusPars html
target.and.grad.spatiotemporal html
tempRaster html
temporalAtRisk html
temporalAtRisk.function html
temporalAtRisk.numeric html
textsummary html
thetaEst html
toral.cov.mat html
touchingowin html
traceplots html
transblack html
transblue html
transgreen html
transred html
txtProgressBar2 html
updateAMCMC html
updateAMCMC.andrieuthomsh html
updateAMCMC.constanth html
varfield html
varfield.lgcpPredict html
varfield.lgcpPredictINLA html
window.lgcpPredict html
wpopdata html
wtowncoords html
wtowns html
xvals html
xvals.SpatialGridDataFrame html
xvals.default html
xvals.fromXYZ html
xvals.lgcpPredict html
yvals html
yvals.SpatialGridDataFrame html
yvals.default html
yvals.fromXYZ html
yvals.lgcpPredict html
zvals html
zvals.SpatialGridDataFrame html
zvals.default html
zvals.fromXYZ html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (lgcp)