* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘labdsv’ ... ** package ‘labdsv’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (Debian 13.3.0-1) 13.3.0’ using Fortran compiler: ‘GNU Fortran (Debian 13.3.0-1) 13.3.0’ make[1]: Entering directory '/tmp/RtmprByeU8/R.INSTALL13e6f95c7265ba/labdsv/src' gfortran-13 -fpic -g -O2 -Wall -mtune=native -c dsvdis.f90 -o dsvdis.o dsvdis.f90:85:18: 85 | a = a + weight(k) | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] dsvdis.f90:86:18: 86 | b = b + weight(k) | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] dsvdis.f90:88:18: 88 | b = b + weight(k) | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] dsvdis.f90:129:18: 129 | a = a + 2 * weight(k) | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] dsvdis.f90:130:18: 130 | b = b + 2 * weight(k) | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] dsvdis.f90:132:18: 132 | b = b + weight(k) | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] dsvdis.f90:175:18: 175 | a = a + weight(k) | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] dsvdis.f90:177:18: 177 | b = b + weight(k) | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] dsvdis.f90:179:18: 179 | c = c + weight(k) | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] dsvdis.f90:389:27: 389 | double precision temp | 1 Warning: Unused variable ‘temp’ declared at (1) [-Wunused-variable] dsvdis.f90:388:29: 388 | double precision totsum | 1 Warning: Unused variable ‘totsum’ declared at (1) [-Wunused-variable] dsvdis.f90:376:34: 376 | subroutine hellin(mat,weight,nrow,ncol,dis,rowsum) | 1 Warning: Unused dummy argument ‘weight’ at (1) [-Wunused-dummy-argument] gfortran-13 -fpic -g -O2 -Wall -mtune=native -c euclid.f90 -o euclid.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c indval.f90 -o indval.o indval.f90:156:16: 156 | index = unifrnd()*pool+1 | 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] gfortran-13 -fpic -g -O2 -Wall -mtune=native -c ismetric.f90 -o ismetric.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c metric.f90 -o metric.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c orddist.f90 -o orddist.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c pip.f90 -o pip.o pip.f90:32:18: 32 | r = (y(i) - polyy(j)) / ydiff | 1 Warning: Possible change of value in conversion from REAL(8) to REAL(4) at (1) [-Wconversion] gcc-13 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c random.c -o random.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c stepdist.f90 -o stepdist.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c thull.f90 -o thull.o gcc-13 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o labdsv.so dsvdis.o euclid.o indval.o ismetric.o metric.o orddist.o pip.o random.o stepdist.o thull.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/tmp/RtmprByeU8/R.INSTALL13e6f95c7265ba/labdsv/src' make[1]: Entering directory '/tmp/RtmprByeU8/R.INSTALL13e6f95c7265ba/labdsv/src' make[1]: Leaving directory '/tmp/RtmprByeU8/R.INSTALL13e6f95c7265ba/labdsv/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-labdsv/00new/labdsv/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘labdsv’ finding HTML links ... done abundtrans html abuocc html as.dsvord html brycesite html bryceveg html calibrate html ccm html compspec html concov html const html convex html defactorize html dematrify html dga html disana html dropplt html dropspc html dsvdis html dsvls html envrtest html euclidify html factorize html gsr html hellinger html homoteneity html importance html indval html isamic html labdsv.internal html matrify html metrify html neighbors html nmds html ordcomm html ordcomp html orddist html ordneighbors html ordpart html ordtest html pca html pco html plot.dsvord html predict html raretaxa html reconcile html rndcomm html rnddist html samptot html spcdisc html spcmax html stepdist html thull html tsne html vegtab html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (labdsv)