* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘jomo’ ... ** package ‘jomo’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-1) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFz5qB9/R.INSTALL116b5a45019a95/jomo/src' gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo1C.c -o jomo1C.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo1ranC.c -o jomo1ranC.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo1ranhrC.c -o jomo1ranhrC.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo1ranhrsmcC.c -o jomo1ranhrsmcC.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo1ransmcC.c -o jomo1ransmcC.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo1smcC.c -o jomo1smcC.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo2comC.c -o jomo2comC.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo2hrC.c -o jomo2hrC.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo2hrsmcC.c -o jomo2hrsmcC.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo2smcC.c -o jomo2smcC.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo_init.c -o jomo_init.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pdflib.c -o pdflib.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wishart.c -o wishart.o gcc-14 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o jomo.so jomo1C.o jomo1ranC.o jomo1ranhrC.o jomo1ranhrsmcC.o jomo1ransmcC.o jomo1smcC.o jomo2comC.o jomo2hrC.o jomo2hrsmcC.o jomo2smcC.o jomo_init.o pdflib.o wishart.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFz5qB9/R.INSTALL116b5a45019a95/jomo/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFz5qB9/R.INSTALL116b5a45019a95/jomo/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFz5qB9/R.INSTALL116b5a45019a95/jomo/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-jomo/00new/jomo/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘jomo’ finding HTML links ... done ExamScores html JSPmiss html cldata html jomo.MCMCchain html jomo html jomo.clmm.MCMCchain html jomo.clmm html jomo.coxph.MCMCchain html jomo.coxph html jomo.glm.MCMCchain html jomo.glm html jomo.glmer.MCMCchain html jomo.glmer html jomo.lm.MCMCchain html jomo.lm html jomo.lmer.MCMCchain html jomo.lmer html jomo.polr.MCMCchain html jomo.polr html jomo.smc.MCMCchain html jomo.smc html jomo1.MCMCchain html jomo1 html jomo1cat.MCMCchain html jomo1cat html jomo1con.MCMCchain html jomo1con html jomo1mix.MCMCchain html jomo1mix html jomo1ran.MCMCchain html jomo1ran html jomo1rancat.MCMCchain html jomo1rancat html jomo1rancathr.MCMCchain html jomo1rancathr html jomo1rancon.MCMCchain html jomo1rancon html jomo1ranconhr.MCMCchain html jomo1ranconhr html jomo1ranmix.MCMCchain html jomo1ranmix html jomo1ranmixhr.MCMCchain html jomo1ranmixhr html jomo2.MCMCchain html jomo2 html jomo2com.MCMCchain html jomo2com html jomo2hr.MCMCchain html jomo2hr html sldata html surdata html tldata html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jomo)