* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘itol.toolkit’ ...
** package ‘itol.toolkit’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘itol.toolkit’
    finding HTML links ... done
    complex_html_text                       html  
    convert_01                              html  
    convert_01_to_connect                   html  
    convert_range_to_node                   html  
    correct_get_color                       html  
    count_to_tree                           html  
    create_hub                              html  
    create_theme                            html  
    create_unit                             html  
    df_merge                                html  
    fa_read                                 html  
    fa_write                                html  
    file_get_dir                            html  
    file_get_name                           html  
    file_to_unit                            html  
    get_color                               html  
    head_line                               html  
    hub_to_unit                             html  
    inbuilt_themes                          html  
    itol.hub-class                          html  
    itol.theme-class                        html  
    itol.unit-class                         html  
    learn_data                              html  
    learn_data_from_file                    html  
    learn_data_from_files                   html  
    learn_data_from_unit                    html  
    learn_data_from_unit_list               html  
    learn_df                                html  
    learn_field                             html  
    learn_legend                            html  
    learn_line                              html  
    learn_profile                           html  
    learn_separator                         html  
    learn_subdf                             html  
    learn_theme_align                       html  
    learn_theme_alignment                   html  
    learn_theme_bar                         html  
    learn_theme_basic_plot                  html  
    learn_theme_basic_theme                 html  
    learn_theme_binary                      html  
    learn_theme_border                      html  
    learn_theme_common_themes               html  
    learn_theme_connection                  html  
    learn_theme_domain                      html  
    learn_theme_externalshape               html  
    learn_theme_heatmap                     html  
    learn_theme_image                       html  
    learn_theme_label                       html  
    learn_theme_linechart                   html  
    learn_theme_piechart                    html  
    learn_theme_specific_themes             html  
    learn_theme_strip_label                 html  
    learn_type                              html  
    line_clean                              html  
    line_split                              html  
    merge_unit                              html  
    plus-methods                            html  
    search_tree_file                        html  
    show-itol.hub-method                    html  
    template_groups                         html  
    template_parameters_count               html  
    train_theme                             html  
    unite_rows                              html  
    use.theme                               html  
    write_hub                               html  
    write_raw                               html  
    write_unit                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (itol.toolkit)