* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘imager’ ... ** package ‘imager’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++-13 -std=gnu++17 accepts -g... yes checking how to run the C++ preprocessor... g++-13 -std=gnu++17 -E checking for X... libraries , headers checking for XOpenDisplay in -lX11... yes X11 library found. configure: Checking if FFTW3 library is available using pkg-config checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for FFTW... yes FFTW3 found! checking whether pkg-config knows about libtiff-4... yes checking for configurable backends... checking whether --static is needed... no checking for g++-13 -std=gnu++17 option to support OpenMP... -fopenmp configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-13 (Debian 13.3.0-1) 13.3.0’ make[1]: Entering directory '/tmp/Rtmps9xNP6/R.INSTALL27fed424cd634b/imager/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c colourspace.cpp -o colourspace.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c coordinates.cpp -o coordinates.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c display.cpp -o display.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c drawing.cpp -o drawing.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c filtering.cpp -o filtering.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c hough.cpp -o hough.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c imgraphs.cpp -o imgraphs.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c interact.cpp -o interact.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c interpolation.cpp -o interpolation.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c morphology.cpp -o morphology.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c reductions.cpp -o reductions.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c transformations.cpp -o transformations.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -Dcimg_use_fftw3 -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -Dcimg_use_tiff -I../inst/include -DCIMG_COMPILING -Dcimg_use_rng -Dcimg_use_r -Dcimg_use_fftw3_singlethread -Dcimg_verbosity=1 -Dcimg_date='""' -Dcimg_time='""' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c wrappers.cpp -o wrappers.o g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o imager.so RcppExports.o colourspace.o coordinates.o display.o drawing.o filtering.o hough.o imgraphs.o interact.o interpolation.o morphology.o reductions.o transformations.o utils.o wrappers.o -fopenmp -lX11 -Dcimg_use_fftw3 -lfftw3 -ltiff -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/tmp/Rtmps9xNP6/R.INSTALL27fed424cd634b/imager/src' make[1]: Entering directory '/tmp/Rtmps9xNP6/R.INSTALL27fed424cd634b/imager/src' make[1]: Leaving directory '/tmp/Rtmps9xNP6/R.INSTALL27fed424cd634b/imager/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-imager/00new/imager/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘imager’ finding HTML links ... done FFT html RasterPackage html add.colour html as.cimg html as.cimg.array html as.cimg.data.frame html as.cimg.function html as.cimg.im html as.cimg.raster html as.data.frame.cimg html as.data.frame.imlist html as.data.frame.pixset html as.igraph.cimg html as.igraph.pixset html as.imlist html as.pixset html as.raster.cimg html at html autocrop html bbox html blur_anisotropic html boats html boundary html boxblur html boxblur_xy html bucketfill html cannyEdges html capture.plot html center.stencil html channels html ci html cimg html cimg.dimensions html cimg.extract html cimg.openmp html cimg2im html circles html clean html colorise html common_pixsets html contours html coord.index html correlate html crop.borders html deriche html diffusion_tensors html displacement html display html display.cimg html display.list html distance_transform html draw_circle html draw_rect html draw_text html erode html extract_patches html flatten.alpha html frames html get.locations html get.stencil html get_gradient html get_hessian html grab html grapes-inr-grapes html grayscale html grow html gsdim html haar html highlight html hough_circle html hough_line html idply html iiply html ilply html im_split html imager html imager.colourspaces html imager.combine html imager.replace html imager.subset html imappend html imchange html imcoord html imdirac html imdraw html imeval html imfill html imgradient html imhessian html iminfo html imlap html imlist html imnoise html implot html imrep html imrotate html imsharpen html imshift html imsplit html imsub html imwarp html index.coord html inpaint html interact html interp html is.cimg html is.imlist html is.pixset html isoblur html label html liply html load.dir html load.example html load.image html load.video html magick html make.video html map_il html medianblur html mirror html mutate_plyr html nfline html pad html patch_summary_cimg html patchstat html periodic.part html permute_axes html pipe html pixel.grid html pixset html play html plot.cimg html plot.imlist html px.flood html px.na html px.remove_outer html renorm html resize html resize_uniform html rm.alpha html rotate_xy html save.image html split_connected html squeeze html stencil.cross html threshold html vanvliet html warp html watershed html where html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (imager)