* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘hmm.discnp’ ... ** package ‘hmm.discnp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-16) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmprdtDML/R.INSTALL23ea9a22e7a28/hmm.discnp/src' gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c afun.f -o afun.o afun.f:53:5: 53 | 23019 continue | 1 Warning: Label 23019 at (1) defined but not used [-Wunused-label] afun.f:47:5: 47 | 23017 continue | 1 Warning: Label 23017 at (1) defined but not used [-Wunused-label] afun.f:37:5: 37 | 23013 continue | 1 Warning: Label 23013 at (1) defined but not used [-Wunused-label] afun.f:41:5: 41 | 23011 continue | 1 Warning: Label 23011 at (1) defined but not used [-Wunused-label] afun.f:56:5: 56 | 23009 continue | 1 Warning: Label 23009 at (1) defined but not used [-Wunused-label] afun.f:26:5: 26 | 23007 continue | 1 Warning: Label 23007 at (1) defined but not used [-Wunused-label] afun.f:20:5: 20 | 23005 continue | 1 Warning: Label 23005 at (1) defined but not used [-Wunused-label] afun.f:14:5: 14 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] afun.f:2:68: 2 | subroutine afun(fy,xispd,tpm,epsilon,n,nstate,wrk,xlc,alpha,nr) | 1 Warning: Unused dummy argument ‘nr’ at (1) [-Wunused-dummy-argument] gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c bfun.f -o bfun.o bfun.f:34:5: 34 | 23013 continue | 1 Warning: Label 23013 at (1) defined but not used [-Wunused-label] bfun.f:29:5: 29 | 23011 continue | 1 Warning: Label 23011 at (1) defined but not used [-Wunused-label] bfun.f:21:5: 21 | 23007 continue | 1 Warning: Label 23007 at (1) defined but not used [-Wunused-label] bfun.f:24:5: 24 | 23005 continue | 1 Warning: Label 23005 at (1) defined but not used [-Wunused-label] bfun.f:37:5: 37 | 23003 continue | 1 Warning: Label 23003 at (1) defined but not used [-Wunused-label] bfun.f:11:5: 11 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c getgl.f -o getgl.o getgl.f:79:5: 79 | 23029 continue | 1 Warning: Label 23029 at (1) defined but not used [-Wunused-label] getgl.f:70:5: 70 | 23027 continue | 1 Warning: Label 23027 at (1) defined but not used [-Wunused-label] getgl.f:74:5: 74 | 23025 continue | 1 Warning: Label 23025 at (1) defined but not used [-Wunused-label] getgl.f:61:5: 61 | 23023 continue | 1 Warning: Label 23023 at (1) defined but not used [-Wunused-label] getgl.f:63:5: 63 | 23021 continue | 1 Warning: Label 23021 at (1) defined but not used [-Wunused-label] getgl.f:51:5: 51 | 23019 continue | 1 Warning: Label 23019 at (1) defined but not used [-Wunused-label] getgl.f:54:5: 54 | 23015 continue | 1 Warning: Label 23015 at (1) defined but not used [-Wunused-label] getgl.f:56:5: 56 | 23013 continue | 1 Warning: Label 23013 at (1) defined but not used [-Wunused-label] getgl.f:81:5: 81 | 23011 continue | 1 Warning: Label 23011 at (1) defined but not used [-Wunused-label] getgl.f:32:5: 32 | 23007 continue | 1 Warning: Label 23007 at (1) defined but not used [-Wunused-label] getgl.f:25:5: 25 | 23003 continue | 1 Warning: Label 23003 at (1) defined but not used [-Wunused-label] getgl.f:27:5: 27 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c gethgl.f -o gethgl.o gethgl.f:180:5: 180 | 23065 continue | 1 Warning: Label 23065 at (1) defined but not used [-Wunused-label] gethgl.f:183:5: 183 | 23063 continue | 1 Warning: Label 23063 at (1) defined but not used [-Wunused-label] gethgl.f:185:5: 185 | 23061 continue | 1 Warning: Label 23061 at (1) defined but not used [-Wunused-label] gethgl.f:168:5: 168 | 23059 continue | 1 Warning: Label 23059 at (1) defined but not used [-Wunused-label] gethgl.f:171:5: 171 | 23057 continue | 1 Warning: Label 23057 at (1) defined but not used [-Wunused-label] gethgl.f:162:5: 162 | 23055 continue | 1 Warning: Label 23055 at (1) defined but not used [-Wunused-label] gethgl.f:154:5: 154 | 23053 continue | 1 Warning: Label 23053 at (1) defined but not used [-Wunused-label] gethgl.f:145:5: 145 | 23051 continue | 1 Warning: Label 23051 at (1) defined but not used [-Wunused-label] gethgl.f:149:5: 149 | 23049 continue | 1 Warning: Label 23049 at (1) defined but not used [-Wunused-label] gethgl.f:136:5: 136 | 23047 continue | 1 Warning: Label 23047 at (1) defined but not used [-Wunused-label] gethgl.f:138:5: 138 | 23045 continue | 1 Warning: Label 23045 at (1) defined but not used [-Wunused-label] gethgl.f:126:5: 126 | 23043 continue | 1 Warning: Label 23043 at (1) defined but not used [-Wunused-label] gethgl.f:129:5: 129 | 23039 continue | 1 Warning: Label 23039 at (1) defined but not used [-Wunused-label] gethgl.f:131:5: 131 | 23037 continue | 1 Warning: Label 23037 at (1) defined but not used [-Wunused-label] gethgl.f:106:5: 106 | 23035 continue | 1 Warning: Label 23035 at (1) defined but not used [-Wunused-label] gethgl.f:108:5: 108 | 23033 continue | 1 Warning: Label 23033 at (1) defined but not used [-Wunused-label] gethgl.f:110:5: 110 | 23031 continue | 1 Warning: Label 23031 at (1) defined but not used [-Wunused-label] gethgl.f:88:5: 88 | 23029 continue | 1 Warning: Label 23029 at (1) defined but not used [-Wunused-label] gethgl.f:96:5: 96 | 23025 continue | 1 Warning: Label 23025 at (1) defined but not used [-Wunused-label] gethgl.f:98:5: 98 | 23021 continue | 1 Warning: Label 23021 at (1) defined but not used [-Wunused-label] gethgl.f:100:5: 100 | 23019 continue | 1 Warning: Label 23019 at (1) defined but not used [-Wunused-label] gethgl.f:156:5: 156 | 23017 continue | 1 Warning: Label 23017 at (1) defined but not used [-Wunused-label] gethgl.f:53:5: 53 | 23013 continue | 1 Warning: Label 23013 at (1) defined but not used [-Wunused-label] gethgl.f:44:5: 44 | 23007 continue | 1 Warning: Label 23007 at (1) defined but not used [-Wunused-label] gethgl.f:46:5: 46 | 23003 continue | 1 Warning: Label 23003 at (1) defined but not used [-Wunused-label] gethgl.f:48:5: 48 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c getl.f -o getl.o getl.f:37:5: 37 | 23013 continue | 1 Warning: Label 23013 at (1) defined but not used [-Wunused-label] getl.f:28:5: 28 | 23011 continue | 1 Warning: Label 23011 at (1) defined but not used [-Wunused-label] getl.f:32:5: 32 | 23009 continue | 1 Warning: Label 23009 at (1) defined but not used [-Wunused-label] getl.f:39:5: 39 | 23007 continue | 1 Warning: Label 23007 at (1) defined but not used [-Wunused-label] getl.f:19:5: 19 | 23003 continue | 1 Warning: Label 23003 at (1) defined but not used [-Wunused-label] getl.f:14:5: 14 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c gfun.f -o gfun.o gfun.f:24:5: 24 | 23009 continue | 1 Warning: Label 23009 at (1) defined but not used [-Wunused-label] gfun.f:19:5: 19 | 23007 continue | 1 Warning: Label 23007 at (1) defined but not used [-Wunused-label] gfun.f:14:5: 14 | 23003 continue | 1 Warning: Label 23003 at (1) defined but not used [-Wunused-label] gfun.f:27:5: 27 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c recurse.f -o recurse.o recurse.f:41:5: 41 | 23009 continue | 1 Warning: Label 23009 at (1) defined but not used [-Wunused-label] recurse.f:43:5: 43 | 23007 continue | 1 Warning: Label 23007 at (1) defined but not used [-Wunused-label] recurse.f:45:5: 45 | 23005 continue | 1 Warning: Label 23005 at (1) defined but not used [-Wunused-label] recurse.f:33:5: 33 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c xfun.f -o xfun.o xfun.f:34:5: 34 | 23015 continue | 1 Warning: Label 23015 at (1) defined but not used [-Wunused-label] xfun.f:36:5: 36 | 23013 continue | 1 Warning: Label 23013 at (1) defined but not used [-Wunused-label] xfun.f:26:5: 26 | 23011 continue | 1 Warning: Label 23011 at (1) defined but not used [-Wunused-label] xfun.f:28:5: 28 | 23009 continue | 1 Warning: Label 23009 at (1) defined but not used [-Wunused-label] xfun.f:18:5: 18 | 23005 continue | 1 Warning: Label 23005 at (1) defined but not used [-Wunused-label] xfun.f:20:5: 20 | 23003 continue | 1 Warning: Label 23003 at (1) defined but not used [-Wunused-label] xfun.f:39:5: 39 | 23001 continue | 1 Warning: Label 23001 at (1) defined but not used [-Wunused-label] gcc-14 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o hmm.discnp.so afun.o bfun.o getgl.o gethgl.o getl.o gfun.o init.o recurse.o xfun.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmprdtDML/R.INSTALL23ea9a22e7a28/hmm.discnp/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmprdtDML/R.INSTALL23ea9a22e7a28/hmm.discnp/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmprdtDML/R.INSTALL23ea9a22e7a28/hmm.discnp/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-hmm.discnp/00new/hmm.discnp/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘hmm.discnp’ finding HTML links ... done SydColDisc html anova.hmm.discnp html ccprSim html cnvrtRho html fitted.hmm.discnp html hmm html hmm.discnp-internal html hydroDat html lesionCount html logLikHmm html misstify html mps html nafracCalc html pr html predict.hmm.discnp html rhmm html scovmat html sp html squantCI html update.hmm.discnp html viterbi html weissData html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hmm.discnp)