* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘heemod’ ...
** package ‘heemod’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘heemod’
    finding HTML links ... done
    acceptability_curve                     html  
    add_hazards                             html  
    apply_af                                html  
    apply_hr                                html  
    apply_or                                html  
    apply_shift                             html  
    as_expr_list                            html  
    calc_prob_from_surv                     html  
    calc_surv_from_prob                     html  
    calibrate_model                         html  
    check_cycle_inputs                      html  
    check_matrix                            html  
    check_names                             html  
    check_states                            html  
    check_strategy_index                    html  
    clean_factors                           html  
    cluster                                 html  
    combine_models                          html  
    combine_probs                           html  
    compute_counts                          html  
    compute_icer                            html  
    compute_surv                            html  
    compute_values                          html  
    construct_part_surv_tib                 html  
    create_demographic_table                html  
    create_df_from_tabular                  html  
    create_matrix_from_tabular              html  
    create_model_from_tabular               html  
    create_model_list_from_tabular          html  
    create_options_from_tabular             html  
    create_parameters_from_tabular          html  
    create_states_from_tabular              html  
    define_calibration_fn                   html  
    define_correlation                      html  
    define_dsa                              html  
    define_inflow                           html  
    define_init                             html  
    define_parameters                       html  
    define_part_surv                        html  
    define_psa                              html  
    define_starting_values                  html  
    define_state                            html  
    define_state_list                       html  
    define_strategy                         html  
    define_surv_dist                        html  
    define_surv_fit                         html  
    define_surv_spline                      html  
    define_surv_table                       html  
    define_transition                       html  
    discount                                html  
    discount_hack                           html  
    dispatch_strategy                       html  
    dispatch_strategy_hack                  html  
    distributions                           html  
    eval_models_from_tabular                html  
    eval_parameters                         html  
    eval_resample                           html  
    eval_state_list                         html  
    eval_strategy                           html  
    eval_strategy_newdata                   html  
    eval_surv                               html  
    eval_transition                         html  
    expand_if_necessary                     html  
    expand_state                            html  
    export_savi                             html  
    extract_params                          html  
    extract_strata                          html  
    extract_stratum                         html  
    file-checkers                           html  
    filter_blanks                           html  
    gather_model_info                       html  
    get_counts                              html  
    get_counts_diff                         html  
    get_frontier                            html  
    get_mat_total                           html  
    get_matrix_order                        html  
    get_parameter_names                     html  
    get_state_names                         html  
    get_state_number                        html  
    get_state_value_names                   html  
    get_transition                          html  
    get_values                              html  
    heemod-package                          html  
    heemod_scale                            html  
    insert                                  html  
    interpolate                             html  
    is.wholenumber                          html  
    join                                    html  
    list_all_same                           html  
    load_surv_models                        html  
    look_up                                 html  
    make_names                              html  
    mix                                     html  
    modify                                  html  
    parse_multi_spec                        html  
    part_survs_from_surv_inputs             html  
    plot.dsa                                html  
    plot.psa                                html  
    plot.run_model                          html  
    plot.surv_object                        html  
    plur                                    html  
    probability                             html  
    project_fn                              html  
    read_file                               html  
    reexports                               html  
    reindent_transition                     html  
    resample_surv                           html  
    rescale_discount_rate                   html  
    run_bcea                                html  
    run_dsa                                 html  
    run_model                               html  
    run_model_tabular                       html  
    run_psa                                 html  
    safe_conversion                         html  
    save_outputs                            html  
    set_covariates                          html  
    summary.run_model                       html  
    summary.surv_shift                      html  
    update_model                            html  
    who_mortality                           html  
    wtd_summary                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (heemod)