* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘hapassoc’ ...
** package ‘hapassoc’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-1) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVMGrMD/R.INSTALL1084c632a1fd7/hapassoc/src'
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c getWts.c -o getWts.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c hapassoc_init.c -o hapassoc_init.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c tapply_sum.c -o tapply_sum.o
gcc-14 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o hapassoc.so getWts.o hapassoc_init.o tapply_sum.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVMGrMD/R.INSTALL1084c632a1fd7/hapassoc/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVMGrMD/R.INSTALL1084c632a1fd7/hapassoc/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVMGrMD/R.INSTALL1084c632a1fd7/hapassoc/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-hapassoc/00new/hapassoc/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘hapassoc’
    finding HTML links ... done
    PreHap                                  html  
    anova_hapassoc                          html  
    hapassoc                                html  
    hypoDat                                 html  
    hypoDatGeno                             html  
    logLik_hapassoc                         html  
    summaryHap                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (hapassoc)