* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘gscramble’ ... ** package ‘gscramble’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘gscramble’ finding HTML links ... done GSP html GSP_opts html Geno html I_meta html M_meta html RecRates html RepPop1 html RepPop4 html check_chrom_lengths html check_gsp_for_validity_and_saturation html check_pedigree_for_inbreeding html check_rec_rates_formatting html check_reppop html computeQs_from_segments html create_GSP html drop_segs_down_gsp html example_chrom_lengths html example_segments html gscramble2newhybrids html gscramble2plink html gsp2dot html gsp3 html gsp4 html make_subscript_matrix html mat_scramble html perm_gs_by_pops html plink2gscramble html plink_map2rec_rates html plot_simulated_chromomsome_segments html prep_gsp_for_hap_dropping html rearrange_genos html recomb_point html renumber_GSP html seg2tib html seg_haps_through_gsp html segments2markers html segregate html sim_level_founder_haplos html tidy_up_sampled_haplos html xover html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gscramble)