* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘ggm’ ...
** this is package ‘ggm’ version ‘2.5.1’
** package ‘ggm’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘ggm’
    finding HTML links ... done
    AG                                      html  
Rd warning: AG.Rd:16: missing link ‘igraph’
    DAG                                     html  
    DG                                      html  
    In                                      html  
    InducedGraphs                           html  
    MAG                                     html  
Rd warning: MAG.Rd:15: missing link ‘igraph’
    MRG                                     html  
Rd warning: MRG.Rd:15: missing link ‘igraph’
    MSG                                     html  
Rd warning: MSG.Rd:15: missing link ‘igraph’
    MarkEqMag                               html  
Rd warning: MarkEqMag.Rd:15: missing link ‘igraph’
    MarkEqRcg                               html  
Rd warning: MarkEqRcg.Rd:15: missing link ‘igraph’
    Max                                     html  
Rd warning: Max.Rd:15: missing link ‘igraph’
    RG                                      html  
Rd warning: RG.Rd:15: missing link ‘igraph’
    RepMarBG                                html  
Rd warning: RepMarBG.Rd:16: missing link ‘igraph’
    RepMarDAG                               html  
Rd warning: RepMarDAG.Rd:18: missing link ‘igraph’
    RepMarUG                                html  
Rd warning: RepMarUG.Rd:17: missing link ‘igraph’
    SG                                      html  
Rd warning: SG.Rd:15: missing link ‘igraph’
    SimpleGraphOperations                   html  
    UG                                      html  
    UtilityFunctions                        html  
    adjMatrix                               html  
    allEdges                                html  
    anger                                   html  
    basiSet                                 html  
    bfsearch                                html  
    binve                                   html  
    blkdiag                                 html  
    blodiag                                 html  
    checkIdent                              html  
    cmpGraph                                html  
    conComp                                 html  
    correlations                            html  
    cycleMatrix                             html  
    dSep                                    html  
    derived                                 html  
    diagv                                   html  
    drawGraph                               html  
    edgematrix                              html  
    essentialGraph                          html  
    findPath                                html  
    fitAncestralGraph                       html  
    fitConGraph                             html  
    fitCovGraph                             html  
    fitDag                                  html  
    fitDagLatent                            html  
    fitmlogit                               html  
    fundCycles                              html  
    ggm                                     html  
Rd warning: ggm.Rd:18: missing link ‘cliques’
    glucose                                 html  
    grMAT                                   html  
Rd warning: grMAT.Rd:14: missing link ‘igraph’
    icf                                     html  
    isADMG                                  html  
    isAG                                    html  
    isAcyclic                               html  
    isGident                                html  
    makeMG                                  html  
    marg.param                              html  
    marks                                   html  
    mat.mlogit                              html  
    msep                                    html  
Rd warning: msep.Rd:14: missing link ‘igraph’
    null                                    html  
Rd warning: null.Rd:29: missing link ‘Null’
    parcor                                  html  
    pcor                                    html  
    pcor.test                               html  
    plotGraph                               html  
Rd warning: plotGraph.Rd:7: missing link ‘igraph’
Rd warning: plotGraph.Rd:22: missing link ‘igraph’
Rd warning: plotGraph.Rd:40: missing link ‘tkplot’
Rd warning: plotGraph.Rd:40: missing link ‘igraph’
Rd warning: plotGraph.Rd:60: missing link ‘tkplot’
Rd warning: plotGraph.Rd:61: missing link ‘plot.igraph’
    powerset                                html  
    rcorr                                   html  
    rnormDag                                html  
    rsphere                                 html  
    shipley.test                            html  
    stress                                  html  
    surdata                                 html  
    swp                                     html  
    topSort                                 html  
    transClos                               html  
    triDec                                  html  
    unmakeMG                                html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ggm)