* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘gensvm’ ... ** package ‘gensvm’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmphmb039/R.INSTALL4358e6539c77d/gensvm/src' gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm_wrapper.c -o gensvm_wrapper.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_base.c -o gensvm/src/gensvm_base.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_checks.c -o gensvm/src/gensvm_checks.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_cmdarg.c -o gensvm/src/gensvm_cmdarg.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_consistency.c -o gensvm/src/gensvm_consistency.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_copy.c -o gensvm/src/gensvm_copy.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_cross_validation.c -o gensvm/src/gensvm_cross_validation.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_cv_util.c -o gensvm/src/gensvm_cv_util.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_debug.c -o gensvm/src/gensvm_debug.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_grid.c -o gensvm/src/gensvm_grid.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_gridsearch.c -o gensvm/src/gensvm_gridsearch.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_init.c -o gensvm/src/gensvm_init.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_io.c -o gensvm/src/gensvm_io.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_kernel.c -o gensvm/src/gensvm_kernel.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_memory.c -o gensvm/src/gensvm_memory.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_optimize.c -o gensvm/src/gensvm_optimize.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_predict.c -o gensvm/src/gensvm_predict.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_print.c -o gensvm/src/gensvm_print.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_queue.c -o gensvm/src/gensvm_queue.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_r_utils.c -o gensvm/src/gensvm_r_utils.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_rand.c -o gensvm/src/gensvm_rand.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_simplex.c -o gensvm/src/gensvm_simplex.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_sparse.c -o gensvm/src/gensvm_sparse.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_strutil.c -o gensvm/src/gensvm_strutil.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_sv.c -o gensvm/src/gensvm_sv.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_task.c -o gensvm/src/gensvm_task.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_timer.c -o gensvm/src/gensvm_timer.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_train.c -o gensvm/src/gensvm_train.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_update.c -o gensvm/src/gensvm_update.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -Igensvm/include/ -I/usr/local/include -D_FORTIFY_SOURCE=3 -DCOLUMN_MAJOR_ORDER -DVERSION=0.2.1 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gensvm/src/gensvm_zv.c -o gensvm/src/gensvm_zv.o gcc-14 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o gensvm.so gensvm_wrapper.o gensvm/src/gensvm_base.o gensvm/src/gensvm_checks.o gensvm/src/gensvm_cmdarg.o gensvm/src/gensvm_consistency.o gensvm/src/gensvm_copy.o gensvm/src/gensvm_cross_validation.o gensvm/src/gensvm_cv_util.o gensvm/src/gensvm_debug.o gensvm/src/gensvm_grid.o gensvm/src/gensvm_gridsearch.o gensvm/src/gensvm_init.o gensvm/src/gensvm_io.o gensvm/src/gensvm_kernel.o gensvm/src/gensvm_memory.o gensvm/src/gensvm_optimize.o gensvm/src/gensvm_predict.o gensvm/src/gensvm_print.o gensvm/src/gensvm_queue.o gensvm/src/gensvm_r_utils.o gensvm/src/gensvm_rand.o gensvm/src/gensvm_simplex.o gensvm/src/gensvm_sparse.o gensvm/src/gensvm_strutil.o gensvm/src/gensvm_sv.o gensvm/src/gensvm_task.o gensvm/src/gensvm_timer.o gensvm/src/gensvm_train.o gensvm/src/gensvm_update.o gensvm/src/gensvm_zv.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR mv gensvm.so gensvm_wrapper.so make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmphmb039/R.INSTALL4358e6539c77d/gensvm/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmphmb039/R.INSTALL4358e6539c77d/gensvm/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmphmb039/R.INSTALL4358e6539c77d/gensvm/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-gensvm/00new/gensvm/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘gensvm’ finding HTML links ... done coef.gensvm html coef.gensvm.grid html fitted.gensvm html fitted.gensvm.grid html gensvm-package html gensvm html gensvm.accuracy html gensvm.generate.cv.idx html gensvm.grid html gensvm.load.full.grid html gensvm.load.small.grid html gensvm.load.tiny.grid html gensvm.maxabs.scale html gensvm.rank.score html gensvm.refit html gensvm.train.test.split html gensvm.validate.param.grid html gensvm.validate.params html plot.gensvm html plot.gensvm.grid html predict.gensvm html predict.gensvm.grid html print.gensvm html print.gensvm.grid html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gensvm)