* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘geneHapR’ ...
** package ‘geneHapR’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘geneHapR’
    finding HTML links ... done
    DataSet                                 html  
    LDheatmap                               html  
    SetATGas0                               html  
    addINFO                                 html  
    addPromoter                             html  
    ashaplotype                             html  
    displayVarOnGeneModel                   html  
    filterLargeVCF                          html  
    filterLargep.link                       html  
    filter_hap                              html  
    filter_hmp                              html  
    filter_plink.pedmap                     html  
    filter_table                            html  
    filter_vcf                              html  
    geneHapR-package                        html  
    getGenePOS                              html  
    getGeneRanges                           html  
    hap2hmp                                 html  
    hapDistribution                         html  
    hapVsPheno                              html  
    hapVsPhenoPerSite                       html  
    hapVsPhenos                             html  
    hap_summary                             html  
    import_AccINFO                          html  
    import_MultipleAlignment                html  
    import_bed                              html  
    import_gff                              html  
    import_hap                              html  
    import_plink.pedmap                     html  
    import_seqs                             html  
    import_vcf                              html  
    network                                 html  
    plink.pedmap2hap                        html  
    plotEFF                                 html  
    plotHapNet                              html  
    plotHapTable                            html  
    plotHapTable2                           html  
    seqs2hap                                html  
    siteEFF                                 html  
    sites_compar                            html  
    table2hap                               html  
    vcf2hap                                 html  
    write.hap                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (geneHapR)