* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘fabMix’ ...
** package ‘fabMix’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpiVu4zO/R.INSTALL2e35c475aaa43e/fabMix/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c fabMix.cpp -o fabMix.o
fabMix.cpp: In function ‘Rcpp::List compute_A_B_G_D_and_simulate_mu_Lambda_CCU(arma::mat, Rcpp::List, arma::mat, int, arma::vec, arma::mat, arma::vec)’:
fabMix.cpp:127:16: warning: unused variable ‘u’ [-Wunused-variable]
127 | double u;
| ^
fabMix.cpp: In function ‘Rcpp::List compute_A_B_G_D_and_simulate_mu_Lambda_CUU(arma::cube, Rcpp::List, arma::mat, int, arma::vec, arma::mat, arma::vec)’:
fabMix.cpp:196:16: warning: unused variable ‘u’ [-Wunused-variable]
196 | double u;
| ^
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o fabMix.so RcppExports.o fabMix.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpiVu4zO/R.INSTALL2e35c475aaa43e/fabMix/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpiVu4zO/R.INSTALL2e35c475aaa43e/fabMix/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpiVu4zO/R.INSTALL2e35c475aaa43e/fabMix/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-fabMix/00new/fabMix/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘fabMix’
finding HTML links ... done
CorMat_mcmc_summary html
CovMat_mcmc_summary html
complete.log.likelihood html
complete.log.likelihood_Sj html
complete.log.likelihood_q0 html
complete.log.likelihood_q0_sameSigma html
compute_A_B_G_D_and_simulate_mu_Lambda
html
compute_A_B_G_D_and_simulate_mu_Lambda_CCU
html
compute_A_B_G_D_and_simulate_mu_Lambda_CUU
html
compute_A_B_G_D_and_simulate_mu_Lambda_Sj
html
compute_A_B_G_D_and_simulate_mu_Lambda_q0
html
compute_A_B_G_D_and_simulate_mu_Lambda_q0_sameSigma
html
compute_sufficient_statistics html
compute_sufficient_statistics_given_mu
html
compute_sufficient_statistics_q0 html
dealWithLabelSwitching html
fabMix-package html
fabMix html
fabMix_CxC html
fabMix_CxU html
fabMix_UxC html
fabMix_UxU html
fabMix_missing_values html
fabMix_parallelModels html
getStuffForDIC html
log_dirichlet_pdf html
myDirichlet html
observed.log.likelihood0 html
observed.log.likelihood0_Sj html
observed.log.likelihood0_Sj_q0 html
observed.log.likelihood0_q0_sameSigma html
overfittingMFA html
overfittingMFA_CCC html
overfittingMFA_CCU html
overfittingMFA_CUC html
overfittingMFA_CUU html
overfittingMFA_Sj html
overfittingMFA_Sj_missing_values html
overfittingMFA_UCC html
overfittingMFA_UUC html
overfittingMFA_missing_values html
overfitting_q0 html
overfitting_q0_sameSigma html
plot.fabMix.object html
print.fabMix.object html
readLambdaValues html
simData html
simData2 html
summary.fabMix.object html
update_OmegaINV html
update_OmegaINV_Cxx html
update_SigmaINV_faster html
update_SigmaINV_faster_Sj html
update_SigmaINV_faster_q0 html
update_SigmaINV_faster_q0_sameSigma html
update_SigmaINV_xCC html
update_SigmaINV_xUC html
update_all_y html
update_all_y_Sj html
update_z2 html
update_z2_Sj html
update_z4 html
update_z4_Sj html
update_z_b html
update_z_b_Sj html
update_z_q0 html
update_z_q0_sameSigma html
waveDataset1500 html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fabMix)