* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘directPA’ ...
** package ‘directPA’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘directPA’
    finding HTML links ... done
    HEK                                     html  
    PM                                      html  
    Pathways.KEGG                           html  
    Pathways.reactome                       html  
    PhosphoELM.human                        html  
    PhosphoELM.mouse                        html  
    PhosphoSite.human                       html  
    PhosphoSite.mouse                       html  
    directExplorer2d                        html  
    directPA-package                        html  
    directPA                                html  
    geneStats                               html  
    kinasePA                                html  
    pathwayStats                            html  
    perturbPlot2d                           html  
    perturbPlot3d                           html  
    rotate2d                                html  
    rotate3d                                html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (directPA)