* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘cuda.ml’ ... ** package ‘cuda.ml’ successfully unpacked and MD5 sums checked ** using staged installation ** preparing to configure package 'cuda.ml' ... *** configured file: 'src/CMakeLists.txt.in' => 'src/CMakeLists.txt' *** configured file: 'src/Makevars.in' => 'src/Makevars' ** finished configure for package 'cuda.ml' ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-1) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c agglomerative_clustering.cpp -o agglomerative_clustering.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cd.cpp -o cd.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cuml_utils.cpp -o cuml_utils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c dbscan.cpp -o dbscan.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c example_linear_model.cpp -o example_linear_model.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fil.cpp -o fil.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c kmeans.cpp -o kmeans.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c knn.cpp -o knn.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lm_predict.cpp -o lm_predict.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ols.cpp -o ols.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c pca.cpp -o pca.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c qn.cpp -o qn.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c random_forest_classifier.cpp -o random_forest_classifier.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c random_forest_regressor.cpp -o random_forest_regressor.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c random_projection.cpp -o random_projection.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ridge.cpp -o ridge.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sgd.cpp -o sgd.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c svm_classifier.cpp -o svm_classifier.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c svm_regressor.cpp -o svm_regressor.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c tsne.cpp -o tsne.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c tsvd.cpp -o tsvd.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src/stubs' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c umap.cpp -o umap.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o cuda.ml.so RcppExports.o agglomerative_clustering.o cd.o cuml_utils.o dbscan.o example_linear_model.o fil.o kmeans.o knn.o lm_predict.o ols.o pca.o qn.o random_forest_classifier.o random_forest_regressor.o random_projection.o ridge.o sgd.o svm_classifier.o svm_regressor.o tsne.o tsvd.o umap.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmposx6KB/R.INSTALL16b1e6dda293b/cuda.ml/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-cuda.ml/00new/cuda.ml/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘cuda.ml’ finding HTML links ... done cuML_major_version html cuML_minor_version html cuda.ml html cuda_ml_agglomerative_clustering html cuda_ml_can_predict_class_probabilities html cuda_ml_dbscan html cuda_ml_elastic_net html cuda_ml_fil_enabled html cuda_ml_fil_load_model html cuda_ml_inverse_transform html cuda_ml_is_classifier html cuda_ml_kmeans html cuda_ml_knn html cuda_ml_knn_algo_ivfflat html cuda_ml_knn_algo_ivfpq html cuda_ml_knn_algo_ivfsq html cuda_ml_lasso html cuda_ml_logistic_reg html cuda_ml_ols html cuda_ml_pca html cuda_ml_rand_forest html cuda_ml_rand_proj html cuda_ml_ridge html cuda_ml_serialize html cuda_ml_sgd html cuda_ml_svm html cuda_ml_transform html cuda_ml_tsne html cuda_ml_tsvd html cuda_ml_umap html cuda_ml_unserialize html has_cuML html predict.cuda_ml_fil html predict.cuda_ml_knn html predict.cuda_ml_linear_model html predict.cuda_ml_logistic_reg html predict.cuda_ml_rand_forest html predict.cuda_ml_svm html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cuda.ml)