* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘cubfits’ ...
** package ‘cubfits’ successfully unpacked and MD5 sums checked
** using staged installation
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpm5wtbP/R.INSTALL1d9fc76b58f0fd/cubfits/src'
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lib.c -o lib.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lp_c_raw.c -o lp_c_raw.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c stable_exp.c -o stable_exp.o
stable_exp.c: In function ‘e_step_with_stable_exp’:
stable_exp.c:15:16: warning: unused variable ‘tmp_exp’ [-Wunused-variable]
15 | double tmp_exp, max_exp;
| ^~~~~~~
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c zzz.c -o zzz.o
gcc-14 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o cubfits.so lib.o lp_c_raw.o stable_exp.o zzz.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpm5wtbP/R.INSTALL1d9fc76b58f0fd/cubfits/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpm5wtbP/R.INSTALL1d9fc76b58f0fd/cubfits/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpm5wtbP/R.INSTALL1d9fc76b58f0fd/cubfits/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-cubfits/00new/cubfits/libs
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘cubfits’
finding HTML links ... done
00_cubfits-package html
a1_cubfits html
a2_cubappr html
a3_cubpred html
b0_plotprxy html
b1_plotbin html
b2_plotmodel html
c0_plot html
c1_io html
c2_convergence html
c9_internal html
s0_init.function html
s1_fitMultinom html
s2_estimatePhi html
t1_simulation html
t2_scuo html
t3_scuo.random html
t4_cai html
t5_scu html
u0_io html
u1_gen html
u2_convert html
u3_rearrange html
u4_asl html
u5_mixnorm html
vv_print html
xx_dataformat html
yy_control html
yy_dataset html
yy_yassour html
yy_yassour_PM html
zz_internal html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cubfits)