* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘contingencytables’ ...
** package ‘contingencytables’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘contingencytables’
finding HTML links ... done
Adjusted_inv_sinh_CI_OR_2x2 html
Adjusted_inv_sinh_CI_ratio_2x2 html
Adjusted_log_CI_2x2 html
AgrestiCaffo_CI_2x2 html
AgrestiCoull_CI_1x2 html
Arcsine_CI_1x2 html
BaptistaPike_exact_conditional_CI_2x2 html
BaptistaPike_midP_CI_2x2 html
Bhapkar_test_paired_cxc html
Blaker_exact_CI_1x2 html
Blaker_exact_test_1x2 html
Blaker_midP_CI_1x2 html
Blaker_midP_test_1x2 html
BonettPrice_hybrid_Wilson_score_CI_CC_paired_2x2
html
BonettPrice_hybrid_Wilson_score_CI_paired_2x2
html
Bonferroni_type_CIs_paired_cxc html
Bonferroni_type_CIs_rxc html
Brant_test_2xc html
BreslowDay_homogeneity_test_stratified_2x2
html
Chacko_test_1xc html
ClopperPearson_exact_CI_1x2 html
ClopperPearson_exact_CI_1x2_beta_version
html
ClopperPearson_midP_CI_1x2 html
CochranArmitage_CI_rx2 html
CochranArmitage_MH_tests_rx2 html
CochranArmitage_exact_cond_midP_tests_rx2
html
CochranMantelHaenszel_test_stratified_2x2
html
Cochran_Q_test_stratified_2x2 html
Cornfield_exact_conditional_CI_2x2 html
Cornfield_midP_CI_2x2 html
Cumulative_models_for_2xc html
Cumulative_models_for_rxc html
Exact_binomial_test_1x2 html
Exact_cond_midP_linear_rank_tests_2xc html
Exact_cond_midP_tests_rxc html
Exact_cond_midP_unspecific_ordering_rx2
html
Exact_multinomial_test_1xc html
Exact_unconditional_test_2x2 html
FisherFreemanHalton_asymptotic_test_rxc
html
Fisher_exact_test_2x2 html
Fisher_midP_test_2x2 html
FleissEveritt_test_paired_cxc html
FleissLevinPaik_test_paired_cxc html
Gart_adjusted_logit_CI_2x2 html
Gold_Wald_CIs_1xc html
Goodman_Wald_CIs_1xc html
Goodman_Wald_CIs_for_diffs_1xc html
Goodman_Wilson_score_CIs_1xc html
Independence_smoothed_logit_CI_2x2 html
Inv_sinh_CI_OR_2x2 html
Inv_sinh_CI_ratio_2x2 html
InverseVariance_estimate_stratified_2x2
html
Jeffreys_CI_1x2 html
JonckheereTerpstra_test_rxc html
Katz_log_CI_2x2 html
Kendalls_tau_b_rxc html
Kendalls_tau_b_rxc_bca html
Koopman_asymptotic_score_CI_2x2 html
KruskalWallis_asymptotic_test_rxc html
LR_CI_1x2 html
LR_test_1x2 html
LR_test_1xc html
LR_test_2x2 html
ML_estimates html
ML_estimates_and_CIs_stratified_2x2 html
MOVER_R_Wilson_CI_OR_2x2 html
MOVER_R_Wilson_CI_ratio_2x2 html
MOVER_Wilson_score_CI_paired_2x2 html
MantelHaenszel_estimate_stratified_2x2
html
MantelHaenszel_test_2xc html
McNemarBowker_test_paired_cxc html
McNemar_asymptotic_test_CC_paired_2x2 html
McNemar_asymptotic_test_paired_2x2 html
McNemar_exact_cond_test_paired_2x2 html
McNemar_exact_unconditional_test_paired_2x2
html
McNemar_midP_test_paired_2x2 html
Mee_asymptotic_score_CI_2x2 html
MidP_binomial_test_1x2 html
MidP_multinomial_test_1xc html
MiettinenNurminen_asymptotic_score_CI_OR_2x2
html
MiettinenNurminen_asymptotic_score_CI_difference_2x2
html
MiettinenNurminen_asymptotic_score_CI_ratio_2x2
html
Newcombe_hybrid_score_CI_2x2 html
Newcombe_square_and_add_CI_paired_2x2 html
Pearson_LR_homogeneity_test_stratified_2x2
html
Pearson_LR_test_common_effect_stratified_2x2
html
Pearson_LR_tests_cum_OR_2xc html
Pearson_LR_tests_rxc html
Pearson_LR_tests_unspecific_ordering_rx2
html
Pearson_chi_squared_test_1xc html
Pearson_chi_squared_test_2x2 html
Pearson_chi_squared_test_CC_2x2 html
Pearson_correlation_coefficient_rxc html
Pearson_correlation_coefficient_rxc_bca
html
Pearson_residuals_rxc html
Peto_OR_estimate_stratified_2x2 html
Peto_homogeneity_test_stratified_2x2 html
PriceBonett_approximate_Bayes_CI_2x2 html
QuesenberryHurst_Wilson_score_CIs_1xc html
RBG_test_and_CI_stratified_2x2 html
Scheffe_type_CIs_paired_cxc html
Scheffe_type_CIs_rxc html
Score_test_1x2 html
Score_test_CC_1x2 html
Score_test_and_CI_marginal_mean_scores_paired_cxc
html
Score_test_for_effect_in_the_probit_model_2xc
html
Spearman_correlation_coefficient_rxc html
Spearman_correlation_coefficient_rxc_bca
html
Stuart_test_paired_cxc html
Tang_asymptotic_score_CI_paired_2x2 html
Tango_asymptotic_score_CI_paired_2x2 html
Transformed_Blaker_exact_CI_paired_2x2
html
Transformed_Clopper_Pearson_exact_CI_paired_2x2
html
Transformed_Clopper_Pearson_midP_CI_paired_2x2
html
Transformed_Wilson_score_CI_paired_2x2
html
Trend_estimate_CI_tests_rx2 html
Uncorrected_asymptotic_score_CI_2x2 html
Wald_CI_1x2 html
Wald_CI_2x2 html
Wald_CI_AgrestiMin_paired_2x2 html
Wald_CI_BonettPrice_paired_2x2 html
Wald_CI_CC_1x2 html
Wald_CI_CC_2x2 html
Wald_CI_OR_Laplace_paired_2x2 html
Wald_CI_OR_paired_2x2 html
Wald_CI_diff_CC_paired_2x2 html
Wald_CI_diff_paired_2x2 html
Wald_CI_ratio_paired_2x2 html
Wald_test_1x2 html
Wald_test_CC_1x2 html
Wald_test_and_CI_common_diff_stratified_2x2
html
Wald_test_and_CI_common_ratio_stratified_2x2
html
Wald_test_and_CI_marginal_mean_ranks_paired_cxc
html
Wald_test_and_CI_marginal_mean_scores_paired_cxc
html
Wilson_score_CI_1x2 html
Wilson_score_CI_CC_1x2 html
Woolf_logit_CI_2x2 html
Woolf_test_and_CI_stratified_2x2 html
Z_unpooled_test_2x2 html
bentur_2009 html
calc_Pvalue_4x2 html
calc_Pvalue_5x2 html
calc_prob html
calculate_limit_lower html
calculate_limit_upper html
cavo_2012 html
chap1 html
chap10 html
chap2 html
chap3 html
chap4 html
chap5 html
chap6 html
chap7 html
chap8 html
chap9 html
contingencytables html
contingencytables_result html
doll_hill_1950 html
dot-onAttach html
ezra_2010 html
fischer_1999 html
fleiss_2003 html
fontanella_2008 html
gamma_coefficient_rxc html
gamma_coefficient_rxc_bca html
hine_1989 html
hypothetical html
indredavik_2008 html
lampasona_2013 html
ligarden_2010 html
linear_by_linear_test_rxc html
list_functions html
lydersen_2012a html
mills_graubard_1987 html
perondi_2004 html
peterson_2007 html
print html
ritland_2007 html
score_test_statistic html
singh_2010_1 html
snp6498169 html
stratified_2x2_tables html
table_7.3 html
table_7.4 html
table_7.5 html
table_7.6 html
table_7.7 html
table_7.8 html
table_7.9 html
tea html
the_1x2_table_CIs html
the_1x2_table_tests html
the_1xc_table_CIs html
the_1xc_table_tests html
the_2x2_table_CIs_OR html
the_2x2_table_CIs_difference html
the_2x2_table_CIs_ratio html
the_2x2_table_tests html
the_2xc_table html
the_paired_2x2_table_CIs_OR html
the_paired_2x2_table_CIs_difference html
the_paired_2x2_table_CIs_ratio html
the_paired_2x2_table_tests html
the_paired_cxc_table_nominal html
the_paired_cxc_table_ordinal html
the_rx2_table html
the_rxc_table html
validateArguments html
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (contingencytables)