* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘cladoRcpp’ ...
** package ‘cladoRcpp’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’
using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpfBV2xC/R.INSTALL744c3746a144c/cladoRcpp/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c basics.cpp -o basics.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c calc_anclikes_sp.cpp -o calc_anclikes_sp.o
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/include/R.h:73,
                 from calc_anclikes_sp.cpp:1:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/exceptions/cpp11/exceptions.h: In function ‘void Rcpp::Rf_warning(const char*, Args&& ...) [with Args = {const char*}]’:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include/R_ext/Error.h:69:17: warning: infinite recursion detected [-Winfinite-recursion]
   69 | #define warning Rf_warning
      |                 ^~~~~~~~~~
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/exceptions/cpp11/exceptions.h:46:13: note: in expansion of macro ‘warning’
   46 | inline void warning(const char* fmt, Args&&... args ) {
      |             ^~~~~~~
In file included from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/exceptions.h:180,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/RcppCommon.h:130,
                 from /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp.h:27,
                 from basics.h:4,
                 from calc_anclikes_sp.cpp:20:
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include/Rcpp/exceptions/cpp11/exceptions.h:47:15: note: recursive call
   47 |     Rf_warning("%s", tfm::format(fmt, std::forward<Args>(args)... ).c_str());
      |     ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o cladoRcpp.so basics.o calc_anclikes_sp.o init.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfBV2xC/R.INSTALL744c3746a144c/cladoRcpp/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpfBV2xC/R.INSTALL744c3746a144c/cladoRcpp/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfBV2xC/R.INSTALL744c3746a144c/cladoRcpp/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-cladoRcpp/00new/cladoRcpp/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘cladoRcpp’
    finding HTML links ... done
    00-cladoRcpp-package                    html  
    Rcpp_combn_zerostart                    html  
    areas_list_to_states_list_old           html  
    numstates_from_numareas                 html  
    rcpp_areas_list_to_states_list          html  
    rcpp_calc_anclikes_sp                   html  
    rcpp_calc_anclikes_sp_COOprobs          html  
    rcpp_calc_anclikes_sp_COOweights_faster
                                            html  
    rcpp_calc_anclikes_sp_prebyte           html  
    rcpp_calc_anclikes_sp_rowsums           html  
    rcpp_calc_anclikes_sp_using_COOprobs    html  
    rcpp_calc_rowsums_for_COOweights_columnar
                                            html  
    rcpp_calc_splitlikes_using_COOweights_columnar
                                            html  
    rcpp_convolve                           html  
    rcpp_mult2probvect                      html  
    rcpp_states_list_to_DEmat               html  
    strsplit3                               html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cladoRcpp)