* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘cglasso’ ... ** package ‘cglasso’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-16) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-16) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQoBIAl/R.INSTALL2987994d00f786/cglasso/src' gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c Find_ConnectedComp.f90 -o Find_ConnectedComp.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c FortranR_interface.c -o FortranR_interface.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c cggm_v1.f90 -o cggm_v1.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c cggm_v2.f90 -o cggm_v2.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c cglasso_v1.f90 -o cglasso_v1.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cglasso_v1_trace.c -o cglasso_v1_trace.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c cglasso_v2.f90 -o cglasso_v2.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cglasso_v2_trace.c -o cglasso_v2_trace.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c dfs.f90 -o dfs.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c e_step_v2.f90 -o e_step_v2.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c fitmcgm.f90 -o fitmcgm.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c glasso_bcd.f90 -o glasso_bcd.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glasso_trace.c -o glasso_trace.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c glassosub.f90 -o glassosub.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c impute.f90 -o impute.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c inv.f90 -o inv.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c lasso.f90 -o lasso.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c lasso_h.f90 -o lasso_h.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c multilasso.f90 -o multilasso.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c predict.f90 -o predict.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c setup.f90 -o setup.o gcc-14 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o cglasso.so Find_ConnectedComp.o FortranR_interface.o cggm_v1.o cggm_v2.o cglasso_v1.o cglasso_v1_trace.o cglasso_v2.o cglasso_v2_trace.o dfs.o e_step_v2.o fitmcgm.o glasso_bcd.o glasso_trace.o glassosub.o impute.o init.o inv.o lasso.o lasso_h.o multilasso.o predict.o setup.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQoBIAl/R.INSTALL2987994d00f786/cglasso/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQoBIAl/R.INSTALL2987994d00f786/cglasso/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQoBIAl/R.INSTALL2987994d00f786/cglasso/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-cglasso/00new/cglasso/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘cglasso’ finding HTML links ... done AIC.cglasso html BIC.cglasso html ColMeans html Example html MKMEP html MM html QFun html ShowStructure html cggm html cglasso-internal html cglasso-package html cglasso html coef.cglasso html datacggm html dim.datacggm html dimnames.datacggm html event html fitted.cglasso html getGraph html getMatrix html hist.datacggm html impute html is.cglasso2igraph html is.datacggm html lower html nobs.datacggm html plot.GoF html plot.cggm html plot.cglasso html plot.cglasso2igraph html predict.cglasso html qqcnorm html rcggm html residuals.cglasso html rowNames html select.cglasso html summary.cglasso html summary.datacggm html to_graph html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cglasso)