* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘catalytic’ ... ** package ‘catalytic’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘catalytic’ finding HTML links ... done cat_cox html cat_cox_bayes html cat_cox_bayes_joint html cat_cox_initialization html cat_cox_tune html cat_glm html cat_glm_bayes html cat_glm_bayes_joint html cat_glm_bayes_joint_gibbs html cat_glm_initialization html cat_glm_tune html cat_lmm html cat_lmm_initialization html cat_lmm_tune html cross_validation html cross_validation_cox html cross_validation_lmm html extract_coefs html extract_dim html extract_stan_summary html extract_tau_seq html get_adjusted_cat_init html get_cox_gradient html get_cox_hessian html get_cox_kappa html get_cox_partial_likelihood html get_cox_qr_solve html get_cox_risk_and_failure_sets html get_cox_risk_set_idx html get_cox_syn_gradient html get_cox_syn_hessian html get_discrepancy html get_formula_lhs html get_formula_rhs html get_formula_string html get_glm_custom_var html get_glm_diag_approx_cov html get_glm_family_string html get_glm_lambda html get_glm_log_density html get_glm_log_density_grad html get_glm_mean html get_glm_sample_data html get_hmc_mcmc_result html get_linear_predictor html get_resampled_df html get_stan_model html get_standardized_data html hmc_neal_2010 html is.continuous html mallowian_estimate html parametric_bootstrap html plot.cat_tune html predict.cat_cox html predict.cat_glm html predict.cat_lmm html print.cat html print.cat_bayes html print.cat_gibbs html print.cat_initialization html print.cat_tune html print_df_head_tail html print_glm_bayes_joint_binomial_suggestion html steinian_estimate html swim html traceplot html traceplot.cat_bayes html traceplot.cat_gibbs html update_lmm_variance html validate_cox_initialization_input html validate_cox_input html validate_glm_initialization_input html validate_glm_input html validate_lmm_initialization_input html validate_lmm_input html validate_positive html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (catalytic)