* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘c212’ ... ** package ‘c212’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.3.0-1) 13.3.0’ make[1]: Entering directory '/tmp/Rtmp0xCAfh/R.INSTALL693102eb22354/c212/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c c2121a.cpp -o c2121a.o c2121a.cpp:16:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 16 | static const char *rcsId = "$Id: c2121a.cpp,v 1.19 2020/09/04 12:49:13 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c c2121a_poisson_mc_hier2_lev0.cpp -o c2121a_poisson_mc_hier2_lev0.o c2121a_poisson_mc_hier2_lev0.cpp:16:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 16 | static const char *rcsId = "$Id: c2121a_poisson_mc_hier2_lev0.cpp,v 1.7 2018/10/03 15:40:28 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c c2121a_poisson_mc_hier2_lev1.cpp -o c2121a_poisson_mc_hier2_lev1.o c2121a_poisson_mc_hier2_lev1.cpp:18:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 18 | static const char *rcsId = "$Id: c2121a_poisson_mc_hier2_lev1.cpp,v 1.6 2018/10/03 15:40:28 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c c2121a_poisson_mc_hier3_lev0.cpp -o c2121a_poisson_mc_hier3_lev0.o c2121a_poisson_mc_hier3_lev0.cpp:17:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 17 | static const char *rcsId = "$Id: c2121a_poisson_mc_hier3_lev0.cpp,v 1.17 2018/10/03 15:40:27 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c c2121a_poisson_mc_hier3_lev1.cpp -o c2121a_poisson_mc_hier3_lev1.o c2121a_poisson_mc_hier3_lev1.cpp:20:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 20 | static const char *rcsId = "$Id: c2121a_poisson_mc_hier3_lev1.cpp,v 1.12 2018/10/03 15:40:27 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c c2121a_poisson_mc_hier3_lev2.cpp -o c2121a_poisson_mc_hier3_lev2.o c2121a_poisson_mc_hier3_lev2.cpp:19:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 19 | static const char *rcsId = "$Id: c2121a_poisson_mc_hier3_lev2.cpp,v 1.17 2018/10/03 15:40:27 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c c212BB.cpp -o c212BB.o In file included from c212BB.cpp:13: c2121a.h:60:30: warning: ‘virtual void c2121a::init(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’ was hidden [-Woverloaded-virtual=] 60 | virtual void init(SEXP Chains, SEXP pBurnin, SEXP pIter, SEXP pNumBodySys, | ^~~~ In file included from c212BB.cpp:14: c212BB.h:149:22: note: by ‘c212BB::init’ 149 | void init(int pChains, int pBurnin, int pIter, int pNumBodySys, | ^~~~ c212BB.cpp:18:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 18 | static const char *rcsId = "$Id: c212BB.cpp,v 1.19 2017/03/22 16:12:08 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c c212BB_poisson_mc_hier2_lev0.cpp -o c212BB_poisson_mc_hier2_lev0.o c212BB_poisson_mc_hier2_lev0.cpp:19:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 19 | static const char *rcsId = "$Id: c212BB_poisson_mc_hier2_lev0.cpp,v 1.9 2018/10/03 15:40:28 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c c212BB_poisson_mc_hier2_lev1.cpp -o c212BB_poisson_mc_hier2_lev1.o c212BB_poisson_mc_hier2_lev1.cpp:20:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 20 | static const char *rcsId = "$Id: c212BB_poisson_mc_hier2_lev1.cpp,v 1.8 2018/10/03 15:40:28 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c c212BB_poisson_mc_hier3_lev0.cpp -o c212BB_poisson_mc_hier3_lev0.o c212BB_poisson_mc_hier3_lev0.cpp:20:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 20 | static const char *rcsId = "$Id: c212BB_poisson_mc_hier3_lev0.cpp,v 1.17 2018/10/03 15:40:27 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c c212BB_poisson_mc_hier3_lev1.cpp -o c212BB_poisson_mc_hier3_lev1.o c212BB_poisson_mc_hier3_lev1.cpp:22:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 22 | static const char *rcsId = "$Id: c212BB_poisson_mc_hier3_lev1.cpp,v 1.14 2018/10/03 15:40:28 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c c212BB_poisson_mc_hier3_lev2.cpp -o c212BB_poisson_mc_hier3_lev2.o c212BB_poisson_mc_hier3_lev2.cpp:21:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 21 | static const char *rcsId = "$Id: c212BB_poisson_mc_hier3_lev2.cpp,v 1.17 2018/10/03 15:40:27 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c c212_exec.cpp -o c212_exec.o c212_exec.cpp:31:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 31 | static const char *rcsId = "$Id: c212_exec.cpp,v 1.26 2018/09/21 10:30:19 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c register.cpp -o register.o register.cpp:18:20: warning: ‘rcsId’ defined but not used [-Wunused-variable] 18 | static const char *rcsId = "$Id: register.cpp,v 1.2 2017/03/28 15:38:23 clb13102 Exp clb13102 $"; | ^~~~~ g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o c212.so c2121a.o c2121a_poisson_mc_hier2_lev0.o c2121a_poisson_mc_hier2_lev1.o c2121a_poisson_mc_hier3_lev0.o c2121a_poisson_mc_hier3_lev1.o c2121a_poisson_mc_hier3_lev2.o c212BB.o c212BB_poisson_mc_hier2_lev0.o c212BB_poisson_mc_hier2_lev1.o c212BB_poisson_mc_hier3_lev0.o c212BB_poisson_mc_hier3_lev1.o c212BB_poisson_mc_hier3_lev2.o c212_exec.o register.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/tmp/Rtmp0xCAfh/R.INSTALL693102eb22354/c212/src' make[1]: Entering directory '/tmp/Rtmp0xCAfh/R.INSTALL693102eb22354/c212/src' make[1]: Leaving directory '/tmp/Rtmp0xCAfh/R.INSTALL693102eb22354/c212/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-c212/00new/c212/libs ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘c212’ finding HTML links ... done c212.1a.interim html c212.1a html c212.BB.interim html c212.BB html c212.FDR.data html c212.Package html c212.bin.test html c212.convergence.diag html c212.err.cntrl html c212.fisher.test html c212.gen.initial.values html c212.global.sim.params html c212.hyper.params html c212.interim.1a.hier2 html c212.interim.1a.hier3 html c212.interim.BB.hier2 html c212.interim.BB.hier3 html c212.interim.MLE html c212.monitor.samples html c212.plot.eot.data html c212.plot.interim.data html c212.plot.samples html c212.pointmass.weights html c212.print.convergence.summary html c212.print.summary.stats html c212.ptheta html c212.sim.control.params html c212.summary.stats html c212.trial.data html c212.trial.interval.data1 html c212.trial.interval.data2 html c212BH.adjust.pvals html c212BH html c212BONF html c212DFDR html c212GBH html c212LSL html c212NOADJ html c212TST html c212ssBH html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (c212)