* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘breakaway’ ... ** package ‘breakaway’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘breakaway’ finding HTML links ... done F_test html alpha_estimate html alpha_estimates html apples html betta html betta_lincom html betta_pic html betta_random html breakaway html breakaway_nof1 html build_frequency_count_tables html chao1 html chao1_bc html chao_bunge html chao_shen html check_format html convert html cutoff_wrap html get_F_stat html good_turing html hawaii html kemp html make_design_matrix html make_frequency_count_table html objective_bayes_geometric html objective_bayes_mixedgeo html objective_bayes_negbin html objective_bayes_poisson html pasolli_et_al html physeq_wrap html pipe html plot.alpha_estimates html poisson_model html poisson_model_nof1 html proportions_instead html rnbinomtable html rztnbinomtable html sample_inverse_simpson html sample_richness html sample_shannon html sample_shannon_e html sample_simpson html sample_size_estimate html sample_size_figure html simulate_betta html simulate_betta_random html soil_phylo html test_submodel html toy_metadata html toy_otu_table html toy_taxonomy html true_gini html true_hill html true_inverse_simpson html true_shannon html true_shannon_e html true_simpson html wlrm_transformed html wlrm_untransformed html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (breakaway)