Install log for 'blockcluster'

* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘blockcluster’ ...
** package ‘blockcluster’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’
using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyEgHXd/R.INSTALL6ef85111d1fec/blockcluster/src'
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init_blockcluster.c -o init_blockcluster.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Algorithms/CEMAlgo.cpp -o coclust/src/Algorithms/CEMAlgo.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Algorithms/EMAlgo.cpp -o coclust/src/Algorithms/EMAlgo.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Algorithms/GibbsAlgo.cpp -o coclust/src/Algorithms/GibbsAlgo.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Algorithms/SEMAlgo.cpp -o coclust/src/Algorithms/SEMAlgo.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/CoClustFacade/CoCluster.cpp -o coclust/src/CoClustFacade/CoCluster.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Strategy/XStrategyAlgo.cpp -o coclust/src/Strategy/XStrategyAlgo.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Strategy/XStrategyforSEMAlgo.cpp -o coclust/src/Strategy/XStrategyforSEMAlgo.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/InputParameters/InputParameters.cpp -o coclust/src/InputParameters/InputParameters.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Models/BinaryLBModel.cpp -o coclust/src/Models/BinaryLBModel.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Models/BinaryLBModelequalepsilon.cpp -o coclust/src/Models/BinaryLBModelequalepsilon.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Models/CategoricalLBModel.cpp -o coclust/src/Models/CategoricalLBModel.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Models/ContingencyLBModel.cpp -o coclust/src/Models/ContingencyLBModel.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Models/ContingencyLBModel_mu_i_nu_j.cpp -o coclust/src/Models/ContingencyLBModel_mu_i_nu_j.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Models/ContinuousLBModel.cpp -o coclust/src/Models/ContinuousLBModel.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Models/ContinuousLBModelequalsigma.cpp -o coclust/src/Models/ContinuousLBModelequalsigma.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c coclust/src/Models/ICoClustModel.cpp -o coclust/src/Models/ICoClustModel.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c BinaryDataExchange.cpp -o BinaryDataExchange.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c CategoricalDataExchange.cpp -o CategoricalDataExchange.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c ContingencyDataExchange.cpp -o ContingencyDataExchange.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c ContinuousDataExchange.cpp -o ContinuousDataExchange.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c IDataExchange.cpp -o IDataExchange.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DRPACKAGE  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CppFlags()"` -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rtkore/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "rtkore:::CxxFlags()"` -fopenmp -fpic  -g -O2 -Wall -pedantic -mtune=native   -c Rcoclustmain.cpp -o Rcoclustmain.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o blockcluster.so init_blockcluster.o coclust/src/Algorithms/CEMAlgo.o coclust/src/Algorithms/EMAlgo.o coclust/src/Algorithms/GibbsAlgo.o coclust/src/Algorithms/SEMAlgo.o coclust/src/CoClustFacade/CoCluster.o coclust/src/Strategy/XStrategyAlgo.o coclust/src/Strategy/XStrategyforSEMAlgo.o coclust/src/InputParameters/InputParameters.o coclust/src/Models/BinaryLBModel.o coclust/src/Models/BinaryLBModelequalepsilon.o coclust/src/Models/CategoricalLBModel.o coclust/src/Models/ContingencyLBModel.o coclust/src/Models/ContingencyLBModel_mu_i_nu_j.o coclust/src/Models/ContinuousLBModel.o coclust/src/Models/ContinuousLBModelequalsigma.o coclust/src/Models/ICoClustModel.o BinaryDataExchange.o CategoricalDataExchange.o ContingencyDataExchange.o ContinuousDataExchange.o IDataExchange.o Rcoclustmain.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyEgHXd/R.INSTALL6ef85111d1fec/blockcluster/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyEgHXd/R.INSTALL6ef85111d1fec/blockcluster/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyEgHXd/R.INSTALL6ef85111d1fec/blockcluster/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-blockcluster/00new/blockcluster/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘blockcluster’
    finding HTML links ... done
    BinaryOptions-class                     html  
    CategoricalOptions-class                html  
    CommonOptions-class                     html  
    ContingencyOptions-class                html  
    ContinuousOptions-class                 html  
    XEMStrategy                             html  
    binarydata                              html  
    blockcluster                            html  
    categoricaldata                         html  
    cocluster                               html  
    coclusterBinary                         html  
    coclusterCategorical                    html  
    coclusterContingency                    html  
    coclusterContinuous                     html  
    coclusterStrategy                       html  
    contingencydatalist                     html  
    contingencydataunknown                  html  
    gaussiandata                            html  
    getter-methods                          html  
    plot-methods                            html  
    summary-methods                         html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (blockcluster)