* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘bioseq’ ... ** package ‘bioseq’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘bioseq’ finding HTML links ... done aa html aliview html alphabets html as-tibble-ape html as-tibble-bioseq html as_AAbin html as_AAbin.tbl_df html as_DNAbin html as_DNAbin.tbl_df html as_aa html as_dna html as_rna html as_seqinr_alignment html bioseq-package html dic_genetic_codes html dna html fragilaria html genetic-codes html internal-methods html is_aa html is_dna html is_rna html new_aa html new_dna html new_rna html pillar_shaft.bioseq_aa html pillar_shaft.bioseq_dna html pillar_shaft.bioseq_rna html read_fasta html rev_complement html rna html seaview html seq-replace html seq_cluster html seq_combine html seq_consensus html seq_count_pattern html seq_crop_pattern html seq_crop_position html seq_detect_pattern html seq_disambiguate_IUPAC html seq_extract_pattern html seq_extract_position html seq_nchar html seq_nseq html seq_remove_pattern html seq_remove_position html seq_replace_position html seq_rev_translate html seq_spellout html seq_split_kmer html seq_split_pattern html seq_stat_gc html seq_stat_prop html seq_translate html transcription html validate_seq html write_fasta html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bioseq)