* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘bamm’ ...
** package ‘bamm’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJCLNDn/R.INSTALL19e178446a6de4/bamm/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c randomize_pams.cpp -o randomize_pams.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o bamm.so RcppExports.o randomize_pams.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJCLNDn/R.INSTALL19e178446a6de4/bamm/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJCLNDn/R.INSTALL19e178446a6de4/bamm/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJCLNDn/R.INSTALL19e178446a6de4/bamm/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-bamm/00new/bamm/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘bamm’
    finding HTML links ... done
    adj_mat                                 html  
    bam-class                               html  
    bam_clusters                            html  
    bam_sim                                 html  
    bam_ssim                                html  
    bioindex-class                          html  
    bioindex_sparse-class                   html  
    community_sim-class                     html  
    community_sim                           html  
    csd-class                               html  
    csd_estimate                            html  
    csim2pam                                html  
    diversity_range-class                   html  
    diversity_range_analysis                html  
    eigen_bam                               html  
    g_area-class                            html  
    jaccard                                 html  
    leaflet-class                           html  
    model2sparse                            html  
    models2pam                              html  
    null_dispersion_field_distribution      html  
    occs2sparse                             html  
    pam-class                               html  
    pam2bioindex                            html  
    pam2richness                            html  
    permute_pam                             html  
    plot                                    html  
    predict                                 html  
    sdm_sim                                 html  
    setA                                    html  
    setM-class                              html  
    shape2Grid                              html  
    show                                    html  
    sim2Animation                           html  
    sim2Raster                              html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (bamm)