* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘aroma.apd’ ... ** package ‘aroma.apd’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘aroma.apd’ finding HTML links ... done Non-documented_objects html aroma.apd-package html cdfToApdMap html celToApd html createApd html findApdMap html gtypeCelToPQ html readApd html readApdHeader html readApdMap html readApdRectangle html readApdUnits html updateApd html updateApdHeader html updateApdUnits html writeApd html writeApdMap html ** building package indices ** testing if installed package can be loaded from temporary location Warning in .requireBiocPackage("affxparser", neededBy = pkgname) : Package 'affxparser' could not be loaded. Without it aroma.apd will not work. Please install it from Bioconductor, cf. https://www.bioconductor.org/ ** testing if installed package can be loaded from final location Warning in .requireBiocPackage("affxparser", neededBy = pkgname) : Package 'affxparser' could not be loaded. Without it aroma.apd will not work. Please install it from Bioconductor, cf. https://www.bioconductor.org/ ** testing if installed package keeps a record of temporary installation path * DONE (aroma.apd)