* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘aqp’ ...
** package ‘aqp’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
** demo
** inst
** byte-compile and prepare package for lazy loading
in method for ‘coerce’ with signature ‘"SoilProfileCollection","tbl_df"’: no definition for class “tbl_df”
in method for ‘coerce’ with signature ‘"SoilProfileCollection","SpatialPointsDataFrame"’: no definition for class “SpatialPointsDataFrame”
in method for ‘coerce’ with signature ‘"SoilProfileCollection","sf"’: no definition for class “sf”
in method for ‘coerce’ with signature ‘"SoilProfileCollection","SpatialPoints"’: no definition for class “SpatialPoints”
Creating a generic function for ‘nrow’ from package ‘base’ in package ‘aqp’
** help
*** installing help indices
converting help for package ‘aqp’
finding HTML links ... done
GHL html
HzDepthLogicSubset html
L1_profiles html
NCSP html
ROSETTA.centroids html
SANN_1D html
SPC.with.overlap html
SoilProfileCollection-class html
SoilProfileCollection-crs html
SoilProfileCollection-plotting-methods
html
SoilTextureLevels html
accumulateDepths html
addBracket html
addDiagnosticBracket html
addVolumeFraction html
aggregateColor html
aggregateSoilDepth html
alignTransect html
allocate html
aqp-package html
aqp_df_class html
argillic.clay.increase.depth html
barron.torrent.redness.LAB html
bootstrapSoilTexture html
brierScore html
buntley.westin.index html
ca630 html
checkHzDepthLogic html
checkSPC html
coercion-methods html
col2Munsell html
collapseHz html
colorChart html
colorContrast html
colorContrastPlot html
colorQuantiles html
combine-SoilProfileCollection-method html
compareSites html
compositeSPC html
confusionIndex html
contrastChart html
contrastClass html
correctAWC html
crit.clay.argillic html
denormalize html
depthOf html
depthWeights html
depth_units html
depths html
diagnostic_hz html
dice-SoilProfileCollection-method html
dollarsign-set html
dollarsign html
doublebracket-set html
doublebracket html
duplicate html
electroStatics_1D html
equivalentMunsellChips html
equivalent_munsell html
estimateAWC html
estimatePSCS html
estimateSoilColor html
estimateSoilDepth html
evalGenHZ html
evalMissingData html
explainPlotSPC html
fillHzGaps html
fixOverlap html
flagOverlappingHz html
fragmentClasses html
fragmentSieve html
genSlabLabels html
generalize.hz html
genhzTableToAdjMat html
get.increase.matrix html
get.ml.hz html
getArgillicBounds html
getCambicBounds html
getClosestMunsellChip html
getLastHorizonID html
getSoilDepthClass html
getSurfaceHorizonDepth html
glom html
glomApply html
grepSPC html
groupSPC html
groupedProfilePlot html
guessGenHzLevels html
guessHzAttrName html
harden.melanization html
harden.rubification html
harmonize-SoilProfileCollection-method
html
hasDarkColors html
horizonColorIndices html
horizonDepths html
horizonNames html
horizons html
huePosition html
huePositionCircle html
hurst.redness html
hzDepthTests html
hzDesgn html
hzDistinctnessCodeToOffset html
hzID html
hzMetadata html
hzOffset html
hzTopographyCodeToLineType html
hzTopographyCodeToOffset html
hzTransitionProbabilities html
hz_dissolve html
hz_intersect html
hz_lag html
hz_segment html
hz_to_taxpartsize html
hzdesgnname html
hzidname html
hzmetaname html
hztexclname html
idname html
initSpatial html
invertLabelColor html
isEmpty html
jacobs2000 html
length html
lookup_taxpartsize html
lunique html
max html
metadata html
min html
missingDataGrid html
mixMunsell html
mollic.thickness.requirement html
munsell html
munsell.spectra html
munsell2rgb html
munsell2spc-SoilProfileCollection-method
html
munsellHuePosition html
mutate_profile html
names html
nrow html
osd html
overlapMetrics html
panel.depth_function html
parseMunsell html
pbindlist html
perturb html
plotColorMixture html
plotColorQuantiles html
plotMultipleSPC html
plot_distance_graph html
previewColors html
profileApply html
profileGroupLabels html
profileInformationIndex html
profile_compare html
profile_id html
quickSPC html
random_profile html
reaction html
reactionclass html
rebuildSPC html
reduceSPC html
reorderHorizons html
repairMissingHzDepths html
replaceHorizons html
restrictions html
rgb2munsell html
rowley2019 html
shannonEntropy html
show html
sierraTransect html
sim html
simulateColor html
singlebracket html
site html
siteNames html
slab html
slice html
slicedHSD html
soilColorSignature html
soilPalette html
soilTextureColorPal html
soil_minerals html
soiltexture html
sp1 html
sp2 html
sp3 html
sp4 html
sp5 html
sp6 html
spc2mpspline-SoilProfileCollection-method
html
spc_in_sync html
spec2Munsell html
spectral.reference html
split-SoilProfileCollection-method html
splitLogicErrors html
subApply html
subset-SoilProfileCollection-method html
subsetHz-SoilProfileCollection-method html
subsetProfiles html
summarizeSPC html
tauW html
texture html
textureTriangleSummary html
thicknessOf html
thompson.bell.darkness html
traditionalColorNames html
transform html
unique html
unroll html
us.state.soils html
validSpatialData html
warpHorizons html
wilson2022 html
xtableTauW html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (aqp)