* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘aglm’ ...
** this is package ‘aglm’ version ‘0.4.0’
** package ‘aglm’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘aglm’
    finding HTML links ... done
    AGLM_Input-class                        html  
    AccurateGLM-class                       html  
    finding level-2 HTML links ... done

Rd warning: AccurateGLM-class.Rd:17: missing link ‘cv.glmnet’
Rd warning: AccurateGLM-class.Rd:19: missing link ‘cv.glmnet’
Rd warning: AccurateGLM-class.Rd:21: missing link ‘cv.glmnet’
Rd warning: AccurateGLM-class.Rd:23: missing link ‘cv.glmnet’
Rd warning: AccurateGLM-class.Rd:25: missing link ‘cv.glmnet’
Rd warning: AccurateGLM-class.Rd:27: missing link ‘cv.glmnet’
Rd warning: AccurateGLM-class.Rd:29: missing link ‘cv.glmnet’
Rd warning: AccurateGLM-class.Rd:31: missing link ‘cv.glmnet’
Rd warning: AccurateGLM-class.Rd:33: missing link ‘cv.glmnet’
Rd warning: AccurateGLM-class.Rd:35: missing link ‘cv.glmnet’
Rd warning: AccurateGLM-class.Rd:37: missing link ‘cv.glmnet’
    CVA_AccurateGLM-class                   html  
    aglm-package                            html  
    aglm                                    html  
    coef.AccurateGLM                        html  
Rd warning: coef.AccurateGLM.Rd:17: missing link ‘coef.glmnet’
Rd warning: coef.AccurateGLM.Rd:19: missing link ‘coef.glmnet’
    createEqualFreqBins                     html  
    createEqualWidthBins                    html  
    cv.aglm                                 html  
    cva.aglm                                html  
    deviance.AccurateGLM                    html  
    executeBinning                          html  
    getLVarMatForOneVec                     html  
    getODummyMatForOneVec                   html  
    getUDummyMatForOneVec                   html  
    plot.AccurateGLM                        html  
    predict.AccurateGLM                     html  
Rd warning: predict.AccurateGLM.Rd:23: missing link ‘predict.glmnet’
Rd warning: predict.AccurateGLM.Rd:25: missing link ‘predict.glmnet’
Rd warning: predict.AccurateGLM.Rd:27: missing link ‘predict.glmnet’
Rd warning: predict.AccurateGLM.Rd:29: missing link ‘predict.glmnet’
Rd warning: predict.AccurateGLM.Rd:35: missing link ‘predict.glmnet’
    print.AccurateGLM                       html  
    residuals.AccurateGLM                   html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (aglm)