* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘VBLPCM’ ... ** package ‘VBLPCM’ successfully unpacked and MD5 sums checked ** using staged installation checking for gsl-config... /usr/bin/gsl-config configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpj5lNfe/R.INSTALL1678642926c3a7/VBLPCM/src' gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG `gsl-config --cflags` -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c KL_funcs.c -o KL_funcs.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG `gsl-config --cflags` -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c VBLPCM.c -o VBLPCM.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG `gsl-config --cflags` -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c adjacency_to_edges.c -o adjacency_to_edges.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG `gsl-config --cflags` -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bb.c -o bb.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG `gsl-config --cflags` -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fruchterman_reingold.c -o fruchterman_reingold.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG `gsl-config --cflags` -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c funcs.c -o funcs.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG `gsl-config --cflags` -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG `gsl-config --cflags` -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c likelihoods.c -o likelihoods.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG `gsl-config --cflags` -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ll_layout.c -o ll_layout.o gcc-14 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o VBLPCM.so KL_funcs.o VBLPCM.o adjacency_to_edges.o bb.o fruchterman_reingold.o funcs.o init.o likelihoods.o ll_layout.o -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpj5lNfe/R.INSTALL1678642926c3a7/VBLPCM/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpj5lNfe/R.INSTALL1678642926c3a7/VBLPCM/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpj5lNfe/R.INSTALL1678642926c3a7/VBLPCM/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-VBLPCM/00new/VBLPCM/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘VBLPCM’ finding HTML links ... done E_to_Y html VBLPCM-internal html VBLPCM-package html Y_to_E html Y_to_M html Y_to_nonE html aids html fruchterman_reingold html gof.vblpcm html hops_to_hopslist html log_like_forces html plot.vblpcm html predict.vblpcm html print.vblpcm html sampson html simulated.network html summary.vblpcm html vblpcmBIC html vblpcmKL html vblpcmcovs html vblpcmdrawpie html vblpcmfit html vblpcmgroups html vblpcmroc html vblpcmstart html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (VBLPCM)