* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘TauStar’ ...
** package ‘TauStar’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpH5ZIvj/R.INSTALL26128f5d56d3f7/TauStar/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c AsymCdfIntegrandEvaluator.cpp -o AsymCdfIntegrandEvaluator.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c AsymDiscreteCdfIntegrandEvaluator.cpp -o AsymDiscreteCdfIntegrandEvaluator.o
AsymDiscreteCdfIntegrandEvaluator.cpp: In member function ‘virtual std::complex<double> AsymDiscreteCdfIntegrandEvaluator::integrand(double, double, double)’:
AsymDiscreteCdfIntegrandEvaluator.cpp:33:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
33 | for(int i = 0; i < eigenP.size(); i++) {
| ~~^~~~~~~~~~~~~~~
AsymDiscreteCdfIntegrandEvaluator.cpp:34:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
34 | for(int j = 0; j < eigenQ.size(); j++) {
| ~~^~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c AsymDiscretePdfIntegrandEvaluator.cpp -o AsymDiscretePdfIntegrandEvaluator.o
AsymDiscretePdfIntegrandEvaluator.cpp: In member function ‘virtual std::complex<double> AsymDiscretePdfIntegrandEvaluator::integrand(double, double, double)’:
AsymDiscretePdfIntegrandEvaluator.cpp:33:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
33 | for(int i = 0; i < eigenP.size(); i++) {
| ~~^~~~~~~~~~~~~~~
AsymDiscretePdfIntegrandEvaluator.cpp:34:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
34 | for(int j = 0; j < eigenQ.size(); j++) {
| ~~^~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c AsymMixedCdfIntegrandEvaluator.cpp -o AsymMixedCdfIntegrandEvaluator.o
AsymMixedCdfIntegrandEvaluator.cpp: In member function ‘virtual std::complex<double> AsymMixedCdfIntegrandEvaluator::integrand(double, double, double)’:
AsymMixedCdfIntegrandEvaluator.cpp:61:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
61 | for(int i = 0; i < eigenP.size(); i++) {
| ~~^~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c AsymMixedPdfIntegrandEvaluator.cpp -o AsymMixedPdfIntegrandEvaluator.o
AsymMixedPdfIntegrandEvaluator.cpp: In member function ‘virtual std::complex<double> AsymMixedPdfIntegrandEvaluator::integrand(double, double, double)’:
AsymMixedPdfIntegrandEvaluator.cpp:34:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
34 | for(int i = 0; i < eigenP.size(); i++) {
| ~~^~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c AsymPdfIntegrandEvaluator.cpp -o AsymPdfIntegrandEvaluator.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c misc.cpp -o misc.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpp_numerical_cdf.cpp -o rcpp_numerical_cdf.o
rcpp_numerical_cdf.cpp: In function ‘void bisect(arma::vec&, arma::vec&, IntegrandEvaluator&, double, double)’:
rcpp_numerical_cdf.cpp:79:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
79 | for (int i = 1; i < positions.size(); i += 2) {
| ~~^~~~~~~~~~~~~~~~~~
rcpp_numerical_cdf.cpp: In function ‘double riemannIntegrate(const arma::vec&, const arma::vec&)’:
rcpp_numerical_cdf.cpp:105:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
105 | for (int i = 1; i <= positions.size() - 2; i++) {
| ~~^~~~~~~~~~~~~~~~~~~~~~~
rcpp_numerical_cdf.cpp: In function ‘arma::vec HoeffIndCdfRCPP(arma::vec, double)’:
rcpp_numerical_cdf.cpp:208:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
208 | for (int i = 0; i < x.size(); i++) {
| ~~^~~~~~~~~~
rcpp_numerical_cdf.cpp: In function ‘arma::vec HoeffIndPdfRCPP(arma::vec, double)’:
rcpp_numerical_cdf.cpp:222:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
222 | for (int i = 0; i < x.size(); i++) {
| ~~^~~~~~~~~~
rcpp_numerical_cdf.cpp: In function ‘arma::vec eigenForDiscreteProbs(arma::vec)’:
rcpp_numerical_cdf.cpp:246:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
246 | for (int i = 1; i < p.size(); i++) {
| ~~^~~~~~~~~~
rcpp_numerical_cdf.cpp:250:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
250 | for (int i = 1; i < p.size(); i++) {
| ~~^~~~~~~~~~
rcpp_numerical_cdf.cpp:255:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
255 | for(int i = 0; i < p.size(); i++) {
| ~~^~~~~~~~~~
rcpp_numerical_cdf.cpp:256:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
256 | for(int j = i; j < p.size(); j++) {
| ~~^~~~~~~~~~
rcpp_numerical_cdf.cpp: In function ‘arma::vec HoeffIndDiscreteCdfRCPP(arma::vec, arma::vec, arma::vec, double)’:
rcpp_numerical_cdf.cpp:286:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
286 | for (int i = 0; i < x.size(); i++) {
| ~~^~~~~~~~~~
rcpp_numerical_cdf.cpp: In function ‘arma::vec HoeffIndDiscretePdfRCPP(arma::vec, arma::vec, arma::vec, double)’:
rcpp_numerical_cdf.cpp:305:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
305 | for (int i = 0; i < x.size(); i++) {
| ~~^~~~~~~~~~
rcpp_numerical_cdf.cpp:301:10: warning: unused variable ‘intervalWidth’ [-Wunused-variable]
301 | double intervalWidth = std::min(std::max(pow((maxError / (2 * (k - 2))),
| ^~~~~~~~~~~~~
rcpp_numerical_cdf.cpp: In function ‘arma::vec HoeffIndMixedCdfRCPP(arma::vec, arma::vec, double)’:
rcpp_numerical_cdf.cpp:319:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
319 | for (int i = 0; i < x.size(); i++) {
| ~~^~~~~~~~~~
rcpp_numerical_cdf.cpp: In function ‘arma::vec HoeffIndMixedPdfRCPP(arma::vec, arma::vec, double)’:
rcpp_numerical_cdf.cpp:333:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘unsigned int’} [-Wsign-compare]
333 | for (int i = 0; i < x.size(); i++) {
| ~~^~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpp_t_star.cpp -o rcpp_t_star.o
rcpp_t_star.cpp: In function ‘void bubbleSort(long double*, int)’:
rcpp_t_star.cpp:63:17: warning: unused variable ‘k’ [-Wunused-variable]
63 | int i,j,k;
| ^
rcpp_t_star.cpp: In function ‘arma::uvec vecToRanks(const arma::vec&)’:
rcpp_t_star.cpp:92:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
92 | for (int i = 0; i < x.n_elem; i++) {
| ~~^~~~~~~~~~
rcpp_t_star.cpp:100:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
100 | for (int i = 0; i < xSortedInds.n_elem; i++) {
| ~~^~~~~~~~~~~~~~~~~~~~
rcpp_t_star.cpp: In function ‘arma::umat ranksToLeqMat(const arma::uvec&, const arma::uvec&)’:
rcpp_t_star.cpp:121:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
121 | for (int i = 0; i < xRanks.n_elem; i++) {
| ~~^~~~~~~~~~~~~~~
rcpp_t_star.cpp: In function ‘arma::umat leqMatToUniqueCountMat(const arma::umat&)’:
rcpp_t_star.cpp:143:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
143 | for (int i = 1; i < leqMat.n_rows; i++) {
| ~~^~~~~~~~~~~~~~~
rcpp_t_star.cpp:144:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
144 | for (int j = 1; j < leqMat.n_cols; j++) {
| ~~^~~~~~~~~~~~~~~
rcpp_t_star.cpp: In function ‘arma::uvec indexUvec(const arma::uvec&, const arma::uvec&)’:
rcpp_t_star.cpp:165:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
165 | for (int i = 0; i < newVec.n_elem; i++) {
| ~~^~~~~~~~~~~~~~~
rcpp_t_star.cpp: In function ‘double TStarHellerAndHellerRCPP(const arma::vec&, const arma::vec&)’:
rcpp_t_star.cpp:195:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘unsigned int’ [-Wsign-compare]
195 | for (int i = 0; i < xRanks.n_elem - 1; i++) {
| ~~^~~~~~~~~~~~~~~~~~~
rcpp_t_star.cpp:196:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
196 | for (int j = i + 1; j < xRanks.n_elem; j++) {
| ~~^~~~~~~~~~~~~~~
rcpp_t_star.cpp: In function ‘double VTStarHellerAndHellerRCPP(const arma::vec&, const arma::vec&)’:
rcpp_t_star.cpp:254:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
254 | for (int i = 0; i < xRanks.n_elem; i++) {
| ~~^~~~~~~~~~~~~~~
rcpp_t_star.cpp:261:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
261 | for (int j = i + 1; j < xRanks.n_elem; j++) {
| ~~^~~~~~~~~~~~~~~
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c red_black_tree.cpp -o red_black_tree.o
red_black_tree.cpp: In function ‘int RBNumLessThan(rb_red_blk_tree*, void*)’:
red_black_tree.cpp:726:13: warning: unused variable ‘tmp’ [-Wunused-variable]
726 | int tmp = 0;
| ^~~
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o TauStar.so AsymCdfIntegrandEvaluator.o AsymDiscreteCdfIntegrandEvaluator.o AsymDiscretePdfIntegrandEvaluator.o AsymMixedCdfIntegrandEvaluator.o AsymMixedPdfIntegrandEvaluator.o AsymPdfIntegrandEvaluator.o RcppExports.o misc.o rcpp_numerical_cdf.o rcpp_t_star.o red_black_tree.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpH5ZIvj/R.INSTALL26128f5d56d3f7/TauStar/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpH5ZIvj/R.INSTALL26128f5d56d3f7/TauStar/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpH5ZIvj/R.INSTALL26128f5d56d3f7/TauStar/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-TauStar/00new/TauStar/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package ‘TauStar’
finding HTML links ... done
TauStar-package html
binaryQuantileSearch html
eigenForDiscreteProbs html
isDiscrete html
isProb html
isProbVector html
isValidDataVector html
pDisHoeffInd html
pHoeffInd html
pMixHoeffInd html
print.tstest html
tStar html
tauStarTest html
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (TauStar)