* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘STRMPS’ ...
** package ‘STRMPS’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘STRMPS’
    finding HTML links ... done
    BLMM                                    html  
    STRMPSWorkflow                          html  
    STRMPSWorkflowBatch                     html  
    STRMPSWorkflowCollectStutters           html  
    extractedReadsList-class                html  
    extractedReadsListCombined-class        html  
    extractedReadsListNonCombined-class     html  
    extractedReadsListReverseComplement-class
                                            html  
    findNeighbours-stringCoverageGenotypeList-method
                                            html  
    findNeighbours                          html  
    findStutter-stringCoverageGenotypeList-method
                                            html  
    findStutter                             html  
    flankingRegions                         html  
    finding level-2 HTML links ... done

    genotypeIdentifiedList-class            html  
    genotypeList                            html  
    getGenotype-stringCoverageList-method   html  
    getGenotype                             html  
    identifiedSTRs                          html  
    identifyNoise-stringCoverageList-method
                                            html  
    identifyNoise                           html  
    identifySTRRegions-ShortReadQ-method    html  
    identifySTRRegions-character-method     html  
    identifySTRRegions                      html  
    identifySTRRegions.control              html  
    mergeGenotypeStringCoverage-genotypeIdentifiedList-method
                                            html  
    mergeGenotypeStringCoverage             html  
    mergeNoiseStringCoverage-noiseIdentifiedList-method
                                            html  
    mergeNoiseStringCoverage                html  
    neighbourList-class                     html  
    noiseIdentifiedList-class               html  
    noiseList                               html  
    probabilityOfError                      html  
    qualityScore                            html  
    stringCoverage-extractedReadsList-method
                                            html  
    stringCoverage-extractedReadsListCombined-method
                                            html  
    stringCoverage-extractedReadsListNonCombined-method
                                            html  
    stringCoverage-extractedReadsListReverseComplement-method
                                            html  
    stringCoverage                          html  
    stringCoverage.control                  html  
    stringCoverageGenotypeList-class        html  
    stringCoverageGenotypeList              html  
    stringCoverageList-class                html  
    stringCoverageList                      html  
    stringCoverageNoiseList-class           html  
    workflow.control                        html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (STRMPS)