* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘RoBSA’ ...
** package ‘RoBSA’ successfully unpacked and MD5 sums checked
** using staged installation
checking for pkg-config... /usr/bin/pkg-config
configure: Setting compile and link flags according to pkg-config
configure: Compile flags are -I/usr/include/JAGS 
configure: Link flags are -ljags  -ljrmath
checking for gcc... gcc-14
checking whether we are using the GNU C compiler... no
checking whether gcc-14 accepts -g... no
checking for gcc-14 option to accept ISO C89... unsupported
checking for jags_version in -ljags... yes
checking version of JAGS library... OK
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’
using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpsozKDA/R.INSTALL3140fc45661041/RoBSA/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c functions/exp.cc -o functions/exp.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c functions/gamma.cc -o functions/gamma.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c functions/llogis.cc -o functions/llogis.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c functions/lnorm.cc -o functions/lnorm.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c functions/weibull.cc -o functions/weibull.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c distributions/EXP.cc -o distributions/EXP.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c distributions/GAMMA.cc -o distributions/GAMMA.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c distributions/LLOGIS.cc -o distributions/LLOGIS.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c distributions/LNORM.cc -o distributions/LNORM.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c distributions/WEIBULL.cc -o distributions/WEIBULL.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c source/distributions.cc -o source/distributions.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RoBSA.cc -o RoBSA.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS  -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0  -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c testRoBSA.cc -o testRoBSA.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o RoBSA.so functions/exp.o functions/gamma.o functions/llogis.o functions/lnorm.o functions/weibull.o distributions/EXP.o distributions/GAMMA.o distributions/LLOGIS.o distributions/LNORM.o distributions/WEIBULL.o source/distributions.o init.o RoBSA.o testRoBSA.o -ljags -ljrmath -ljrmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpsozKDA/R.INSTALL3140fc45661041/RoBSA/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpsozKDA/R.INSTALL3140fc45661041/RoBSA/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpsozKDA/R.INSTALL3140fc45661041/RoBSA/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-RoBSA/00new/RoBSA/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘RoBSA’
    finding HTML links ... done
    RoBSA-package                           html  
    RoBSA                                   html  
    RoBSA_control                           html  
    RoBSA_options                           html  
    calibrate_meta_analytic                 html  
    calibrate_quartiles                     html  
    check_RoBSA                             html  
    check_setup                             html  
    contr.meandif                           html  
    contr.orthonormal                       html  
    default_prior                           html  
    diagnostics                             html  
    exp-aft                                 html  
    extract_flexsurv                        html  
    gamma-aft                               html  
    is.RoBSA                                html  
    llogis-aft                              html  
    lnorm-aft                               html  
    plot.RoBSA                              html  
    plot_models                             html  
    plot_prediction                         html  
    predict.RoBSA                           html  
    print.RoBSA                             html  
    print.summary.RoBSA                     html  
    prior                                   html  
    prior_factor                            html  
    prior_informed                          html  
    prior_informed_medicine_names           html  
    prior_none                              html  
    summary.RoBSA                           html  
    update.RoBSA                            html  
    weibull-aft                             html  
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RoBSA)