* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘Rmpi’ ... ** package ‘Rmpi’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... gcc-14 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc-14 accepts -g... yes checking for gcc-14 option to accept ISO C89... none needed checking for pkg-config... /usr/bin/pkg-config checking if pkg-config knows about OpenMPI... yes checking for orted... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-6) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHRJ6KE/R.INSTALLd1c945eb56631/Rmpi/src' gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -DMPI2 -DOPENMPI -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Rmpi.c -o Rmpi.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -DMPI2 -DOPENMPI -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c conversion.c -o conversion.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/usr/lib/x86_64-linux-gnu/openmpi/include -I/usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/openmpi -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi -DMPI2 -DOPENMPI -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c internal.c -o internal.o internal.c: In function ‘mpi_errhandler’: internal.c:26:14: warning: unused variable ‘errmsg’ [-Wunused-variable] 26 | char errmsg[MPI_MAX_ERROR_STRING]; | ^~~~~~ internal.c:25:13: warning: unused variable ‘errmsglen’ [-Wunused-variable] 25 | int errmsglen; | ^~~~~~~~~ gcc-14 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o Rmpi.so Rmpi.o conversion.o internal.o -L/usr/lib/x86_64-linux-gnu/openmpi/lib -lmpi -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHRJ6KE/R.INSTALLd1c945eb56631/Rmpi/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHRJ6KE/R.INSTALLd1c945eb56631/Rmpi/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHRJ6KE/R.INSTALLd1c945eb56631/Rmpi/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-Rmpi/00new/Rmpi/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘Rmpi’ finding HTML links ... done hosts html internal html mpi.abort html mpi.apply html mpi.barrier html mpi.bcast html mpi.bcast.Robj html mpi.bcast.cmd html mpi.cart.coords html mpi.cart.create html mpi.cart.get html mpi.cart.rank html mpi.cart.shift html mpi.cartdim.get html mpi.comm html mpi.comm.disconnect html mpi.comm.free html mpi.comm.inter html mpi.comm.set.errhandler html mpi.comm.spawn html mpi.const html mpi.dims.create html mpi.exit html mpi.finalize html mpi.gather html mpi.gather.Robj html mpi.get.count html mpi.get.processor.name html mpi.get.sourcetag html mpi.iapply html mpi.info html mpi.intercomm.merge html mpi.parSim html mpi.parapply html mpi.probe html mpi.realloc html mpi.reduce html mpi.remote.exec html mpi.scatter html mpi.scatter.Robj html mpi.send html mpi.send.Robj html mpi.sendrecv html mpi.setup.rng html mpi.spawn.Rslaves html mpi.universe.size html mpi.wait html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rmpi)