* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘RVA’ ...
** package ‘RVA’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘RVA’
    finding HTML links ... done
    Sample_disease_gene_set                 html  
    Sample_summary_statistics_table         html  
    Sample_summary_statistics_table1        html  
    c2BroadSets                             html  
    cal.pathway.scores                      html  
    calc.cfb                                html  
    count_table                             html  
    dlPathwaysDB                            html  
    get.cpm.colors                          html  
    get.cutoff.df                           html  
    get.cutoff.ggplot                       html  
    make.cutoff.plotly                      html  
    multiPlot                               html  
    nullreturn                              html  
    plot_cutoff                             html  
    plot_cutoff_single                      html  
    plot_gene                               html  
    plot_heatmap.cfb                        html  
    plot_heatmap.cpm                        html  
    plot_heatmap.expr                       html  
    plot_pathway                            html  
    plot_qq                                 html  
    plot_volcano                            html  
    prettyGraphs                            html  
    produce.cutoff.message                  html  
    produce.cutoff.warning                  html  
    reformat.ensembl                        html  
    sample_annotation                       html  
    sample_count_cpm                        html  
    secondCutoffErr                         html  
    transform.geneid                        html  
    validate.FC                             html  
    validate.annot                          html  
    validate.baseline                       html  
    validate.col.types                      html  
    validate.comp.names                     html  
    validate.data                           html  
    validate.data.annot                     html  
    validate.flag                           html  
    validate.genes.present                  html  
    validate.geneset                        html  
    validate.numeric                        html  
    validate.pathways.db                    html  
    validate.pval.range                     html  
    validate.pvalflag                       html  
    validate.pvals                          html  
    validate.single.table.isnotlist         html  
    validate.stats                          html  
    validate.stats.cols                     html  
    wpA2020                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RVA)