* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘RPostgreSQL’ ... ** package ‘RPostgreSQL’ successfully unpacked and MD5 sums checked ** using staged installation checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu checking for pg_config... /usr/bin/pg_config PG_CONFIG_BINDIR = /usr/lib/postgresql/17/bin PG_CONFIG_DOCDIR = /usr/share/doc/postgresql-doc-17 PG_CONFIG_HTMLDIR = /usr/share/doc/postgresql-doc-17 PG_CONFIG_INCLUDEDIR = /usr/include/postgresql PG_CONFIG_PKGINCLUDEDIR = /usr/include/postgresql PG_CONFIG_INCLUDEDIR-SERVER = /usr/include/postgresql/17/server PG_CONFIG_LIBDIR = /usr/lib/x86_64-linux-gnu PG_CONFIG_PKGLIBDIR = /usr/lib/postgresql/17/lib PG_CONFIG_LOCALEDIR = /usr/share/locale PG_CONFIG_MANDIR = /usr/share/postgresql/17/man PG_CONFIG_SHAREDIR = /usr/share/postgresql/17 PG_CONFIG_SYSCONFDIR = /etc/postgresql-common PG_CONFIG_PGXS = /usr/lib/postgresql/17/lib/pgxs/src/makefiles/pgxs.mk PG_CONFIG_CONFIGURE = '--build=x86_64-linux-gnu' '--prefix=/usr' '--includedir=${prefix}/include' '--mandir=${prefix}/share/man' '--infodir=${prefix}/share/info' '--sysconfdir=/etc' '--localstatedir=/var' '--disable-option-checking' '--disable-silent-rules' '--libdir=${prefix}/lib/x86_64-linux-gnu' '--runstatedir=/run' '--disable-maintainer-mode' '--disable-dependency-tracking' '--with-tcl' '--with-perl' '--with-python' '--with-pam' '--with-openssl' '--with-libxml' '--with-libxslt' '--mandir=/usr/share/postgresql/17/man' '--docdir=/usr/share/doc/postgresql-doc-17' '--sysconfdir=/etc/postgresql-common' '--datarootdir=/usr/share/' '--datadir=/usr/share/postgresql/17' '--bindir=/usr/lib/postgresql/17/bin' '--libdir=/usr/lib/x86_64-linux-gnu/' '--libexecdir=/usr/lib/postgresql/' '--includedir=/usr/include/postgresql/' '--with-extra-version= (Debian 17.2-1)' '--enable-nls' '--enable-thread-safety' '--enable-debug' '--disable-rpath' '--with-uuid=e2fs' '--with-gnu-ld' '--with-gssapi' '--with-ldap' '--with-pgport=5432' '--with-system-tzdata=/usr/share/zoneinfo' 'AWK=mawk' 'MKDIR_P=/bin/mkdir -p' 'PROVE=/usr/bin/prove' 'PYTHON=/usr/bin/python3' 'TAR=/bin/tar' 'XSLTPROC=xsltproc --nonet' 'CFLAGS=-g -O2 cflwarnerror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection cflwarnformat cflwarnerror=format-security -fcf-protection -fno-omit-frame-pointer' 'LDFLAGS=cflwarnl,-z,relro cflwarnl,-z,now' '--enable-tap-tests' '--with-icu' '--with-llvm' 'LLVM_CONFIG=/usr/bin/llvm-config-19' 'CLANG=/usr/bin/clang-19' '--with-lz4' '--with-zstd' '--with-systemd' '--with-selinux' '--enable-dtrace' 'build_alias=x86_64-linux-gnu' 'CPPFLAGS=cflwarndate-time -D_FORTIFY_SOURCE=2' 'CXXFLAGS=-g -O2 -fstack-protector-strong -fstack-clash-protection cflwarnformat cflwarnerror=format-security -fcf-protection' PG_CONFIG_CC = gcc PG_CONFIG_CPPFLAGS = cflwarndate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2 PG_CONFIG_CFLAGS = cflwarnall cflwarnmissing-prototypes cflwarnpointer-arith cflwarndeclaration-after-statement cflwarnerror=vla cflwarnendif-labels cflwarnmissing-format-attribute cflwarnimplicit-fallthrough=3 cflwarncast-function-type cflwarnshadow=compatible-local cflwarnformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard cflwarnno-format-truncation cflwarnno-stringop-truncation -g -g -O2 cflwarnerror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection cflwarnformat cflwarnerror=format-security -fcf-protection -fno-omit-frame-pointer PG_CONFIG_CFLAGS_SL = -fPIC PG_CONFIG_LDFLAGS = cflwarnl,-z,relro cflwarnl,-z,now -L/usr/lib/llvm-19/lib cflwarnl,--as-needed PG_CONFIG_LDFLAGS_EX = PG_CONFIG_LDFLAGS_SL = PG_CONFIG_LIBS = -lpgcommon -lpgport -lselinux -lzstd -llz4 -lxslt -lxml2 -lpam -lssl -lcrypto -lgssapi_krb5 -lz -lreadline -lm PG_CONFIG_VERSION = PostgreSQL 17.2 (Debian 17.2-1) configure: checking for PostgreSQL header files /usr/lib/x86_64-linux-gnu /usr/include/postgresql gcc-14 -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -I/usr/include/postgresql -L/usr/lib/x86_64-linux-gnu conftest.c -lpq -o pqconftest ./pqconftest 170002...runs fine checking for "/usr/include/postgresql/libpq-fe.h"... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCCFNgD/R.INSTALL1fa3ab26e784c0/RPostgreSQL/src' gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c RS-DBI.c -o RS-DBI.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c RS-PQescape.c -o RS-PQescape.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c RS-PostgreSQL.c -o RS-PostgreSQL.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c RS-pgsql-copy.c -o RS-pgsql-copy.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c RS-pgsql-getResult.c -o RS-pgsql-getResult.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c RS-pgsql-pqexec.c -o RS-pgsql-pqexec.o gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c RS-pgsql-pqexecparams.c -o RS-pgsql-pqexecparams.o gcc-14 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o RPostgreSQL.so RS-DBI.o RS-PQescape.o RS-PostgreSQL.o RS-pgsql-copy.o RS-pgsql-getResult.o RS-pgsql-pqexec.o RS-pgsql-pqexecparams.o -L/usr/lib/x86_64-linux-gnu -lpq -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCCFNgD/R.INSTALL1fa3ab26e784c0/RPostgreSQL/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCCFNgD/R.INSTALL1fa3ab26e784c0/RPostgreSQL/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCCFNgD/R.INSTALL1fa3ab26e784c0/RPostgreSQL/src' installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-RPostgreSQL/00new/RPostgreSQL/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘RPostgreSQL’ finding HTML links ... done PostgreSQL html PostgreSQLConnection-class html PostgreSQLDriver-class html PostgreSQLObject-class html PostgreSQLResult-class html S4R html dbApply-methods html dbApply html dbCallProc-methods html dbCommit-methods html dbConnect-methods html dbDataType-methods html dbDriver-methods html dbGetInfo-methods html dbListTables-methods html dbObjectId-class html dbReadTable-methods html dbSendQuery-methods html dbSetDataMappings-methods html fetch-methods html isPostgresqlIdCurrent html make.db.names-methods html postgresqlBuildTableDefinition html postgresqlDBApply html postgresqlSupport html summary-methods html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RPostgreSQL)