* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘RCPA’ ...
** package ‘RCPA’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘RCPA’
    finding HTML links ... done
    downloadGEO                             html  
    getCePaPathwayCatalogue                 html  
    getCommonDEGenes                        html  
    getCommonPathways                       html  
    getEntrezAnnotation                     html  
    getGeneSets                             html  
    getSPIAKEGGNetwork                      html  
    getSupportedPlatforms                   html  
    loadData                                html  
    plotBarChart                            html  
    plotDEGeneHeatmap                       html  
    plotForest                              html  
    plotKEGGMap                             html  
    plotMA                                  html  
    plotPathwayHeatmap                      html  
    plotPathwayNetwork                      html  
    plotVennDE                              html  
    plotVennPathway                         html  
    plotVolcanoDE                           html  
    plotVolcanoPathway                      html  
    processAffymetrix                       html  
    processAgilent                          html  
    runConsensusAnalysis                    html  
    runDEAnalysis                           html  
    runDEMetaAnalysis                       html  
    runGeneSetAnalysis                      html  
    runPathwayAnalysis                      html  
    runPathwayMetaAnalysis                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RCPA)