* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘QTLRel’ ...
** package ‘QTLRel’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-14 (Debian 14.2.0-12) 14.2.0’
using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-12) 14.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp7v0zN8/R.INSTALL1a74d83c2457d1/QTLRel/src'
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c QTLRelR.c -o QTLRelR.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c distn.c -o distn.o
gfortran-14  -fpic  -g -O2 -Wall -pedantic -mtune=native  -c dqrls.f -o dqrls.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c ibsFn.c -o ibsFn.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c idcoef.c -o idcoef.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c imFn.c -o imFn.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c ks.c -o ks.o
ks.c:38:1: warning: ‘pkstwo’ defined but not used [-Wunused-function]
   38 | pkstwo(int n, double *x, double tol)
      | ^~~~~~
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c qqplot.c -o qqplot.o
gcc-14 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c rgdat.c -o rgdat.o
gfortran-14  -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sc10.f -o sc10.o
gfortran-14  -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sc11.f -o sc11.o
gfortran-14  -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sc20.f -o sc20.o
gfortran-14  -fpic  -g -O2 -Wall -pedantic -mtune=native  -c sc21.f -o sc21.o
gcc-14 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o QTLRel.so QTLRelR.o distn.o dqrls.o ibsFn.o idcoef.o imFn.o init.o ks.o qqplot.o rgdat.o sc10.o sc11.o sc20.o sc21.o -llapack -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp7v0zN8/R.INSTALL1a74d83c2457d1/QTLRel/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp7v0zN8/R.INSTALL1a74d83c2457d1/QTLRel/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp7v0zN8/R.INSTALL1a74d83c2457d1/QTLRel/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-QTLRel/00new/QTLRel/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘QTLRel’
    finding HTML links ... done
    aicVC                                   html  
    blup                                    html  
    cic                                     html  
    eigen_sym                               html  
    estVC                                   html  
    genMatrix                               html  
    genoImpute                              html  
    genoProb                                html  
    genoSim                                 html  
    gls                                     html  
    hapSim                                  html  
    ibs                                     html  
    kinship                                 html  
    lodci                                   html  
    mAIC                                    html  
    misFct                                  html  
    miscEx                                  html  
    nullSim                                 html  
    pedRecode                               html  
    plots                                   html  
    qqplot                                  html  
    qtl2rel                                 html  
    qtlVar                                  html  
    rel2qtl                                 html  
    rem                                     html  
    scanOne                                 html  
    scanTwo                                 html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (QTLRel)