* using log directory ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/MetAlyzer.Rcheck’
* using R version 4.4.3 RC (2025-02-20 r87839)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc-14 (Debian 14.2.0-16) 14.2.0
    GNU Fortran (Debian 14.2.0-16) 14.2.0
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘MetAlyzer/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘MetAlyzer’ version ‘1.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MetAlyzer’ can be installed ... OK
See 'https://www.r-project.org/nosvn/R.check/r-patched-linux-x86_64/MetAlyzer-00install.html' for details.
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [10s/14s] OK
* checking whether the package can be loaded with stated dependencies ... [9s/12s] OK
* checking whether the package can be unloaded cleanly ... [9s/12s] OK
* checking whether the namespace can be loaded with stated dependencies ... [10s/12s] OK
* checking whether the namespace can be unloaded cleanly ... [11s/14s] OK
* checking loading without being on the library search path ... [11s/14s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [45s/62s] OK
* checking Rd files ... [0s/1s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [82s/105s] OK
Examples with CPU (user + system) or elapsed time > 5s
                  user system elapsed
plotly_scatter   7.956  0.138  10.948
calculate_cv     7.237  0.036   8.184
plotly_network   6.650  0.095   8.407
calculate_anova  5.507  0.135   6.711
plot_network     5.128  0.036   7.308
calculate_log2FC 4.764  0.077   6.646
plotly_vulcano   4.488  0.051   5.805
log2FC           4.247  0.004   5.377
plot_log2FC      4.139  0.016   5.468
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [242s/301s] OK
* checking PDF version of manual ... [5s/6s] OK
* checking HTML version of manual ... [1s/2s] OK
* checking for non-standard things in the check directory ... OK
* DONE
Status: OK