* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘MSclassifR’ ...
** this is package ‘MSclassifR’ version ‘0.5.0’
** package ‘MSclassifR’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-14 (Debian 14.3.0-10) 14.3.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpick6ek/R.INSTALL31449469e1134e/MSclassifR/src'
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c colwise_tests.cpp -o colwise_tests.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c landmark_align.cpp -o landmark_align.o
g++-14 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c moz.cpp -o moz.o
g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o MSclassifR.so RcppExports.o colwise_tests.o landmark_align.o moz.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpick6ek/R.INSTALL31449469e1134e/MSclassifR/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpick6ek/R.INSTALL31449469e1134e/MSclassifR/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpick6ek/R.INSTALL31449469e1134e/MSclassifR/src'
installing to /home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/00LOCK-MSclassifR/00new/MSclassifR/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘MSclassifR’
    finding HTML links ... done
    CitrobacterRKImetadata                  html  
    CitrobacterRKIspectra                   html  
    LogReg                                  html  
    LogReg_rf_fast                          html  
    MSclassifR-cpp-helpers                  html  
    MSclassifR                              html  
    PeakDetection                           html  
    PlotSpectra                             html  
    PredictFastClass                        html  
    PredictLogReg                           html  
    SelectionVar                            html  
    SelectionVarStat                        html  
    SignalProcessing                        html  
    SignalProcessingUltra                   html  
    build_XY_from_peaks                     html  
    build_X_from_peaks_fast                 html  
    calculate_distance                      html  
    d_left_join                             html  
    dot-safe_n_workers                      html  
    fast_cvpvi                              html  
    fast_find_neighbors                     html  
    fast_generate_synthetic                 html  
    fast_mda                                html  
    msclassifr-internal                     html  
    smote_classif                           html  
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MSclassifR)