* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’
* installing *source* package ‘MRPC’ ...
** this is package ‘MRPC’ version ‘3.1.0’
** package ‘MRPC’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package ‘MRPC’
    finding HTML links ... done
    AdjustMatrix                            html  
    CompareMethodsNodeOrdering              html  
Rd warning: CompareMethodsNodeOrdering.Rd:7: missing link ‘pc’
Rd warning: CompareMethodsNodeOrdering.Rd:7: missing link ‘pc.stable’
Rd warning: CompareMethodsNodeOrdering.Rd:7: missing link ‘mmpc’
Rd warning: CompareMethodsNodeOrdering.Rd:7: missing link ‘mmhc’
Rd warning: CompareMethodsNodeOrdering.Rd:7: missing link ‘hc’
    CompareMethodsVStructure                html  
Rd warning: CompareMethodsVStructure.Rd:8: missing link ‘pc’
Rd warning: CompareMethodsVStructure.Rd:8: missing link ‘pc.stable’
Rd warning: CompareMethodsVStructure.Rd:8: missing link ‘mmpc’
Rd warning: CompareMethodsVStructure.Rd:8: missing link ‘mmhc’
Rd warning: CompareMethodsVStructure.Rd:8: missing link ‘hc’
    CutModules                              html  
Rd warning: CutModules.Rd:8: missing link ‘cut2’
    Data_GEUVADIS                           html  
    EdgeOrientation                         html  
Rd warning: EdgeOrientation.Rd:76: missing link ‘graph-class’
    IdentifyAssociatedPCs                   html  
    MRPC                                    html  
Rd warning: MRPC.Rd:7: missing link ‘pc’
Rd warning: MRPC.Rd:17: missing link ‘pc’
Rd warning: MRPC.Rd:35: missing link ‘ci.test’
Rd warning: MRPC.Rd:37: missing link ‘gaussCItest’
Rd warning: MRPC.Rd:37: missing link ‘pc’
Rd warning: MRPC.Rd:37: missing link ‘ci.test’
Rd warning: MRPC.Rd:98: missing link ‘graph-class’
    MRPCclass                               html  
Rd warning: MRPCclass.Rd:10: missing link ‘pcAlgo-class’
Rd warning: MRPCclass.Rd:40: missing link ‘skeleton’
Rd warning: MRPCclass.Rd:40: missing link ‘pc’
Rd warning: MRPCclass.Rd:67: missing link ‘graph-class’
    MRPCtruth                               html  
    ModiSkeleton                            html  
Rd warning: ModiSkeleton.Rd:8: missing link ‘skeleton’
Rd warning: ModiSkeleton.Rd:19: missing link ‘skeleton’
Rd warning: ModiSkeleton.Rd:19: missing link ‘pc’
Rd warning: ModiSkeleton.Rd:35: missing link ‘ci.test’
Rd warning: ModiSkeleton.Rd:96: missing link ‘graph-class’
    PlotDendrogram                          html  
Rd warning: PlotDendrogram.Rd:25: missing link ‘plotDendroAndColors’
Rd warning: PlotDendrogram.Rd:28: missing link ‘plotDendroAndColors’
Rd warning: PlotDendrogram.Rd:34: missing link ‘plotDendroAndColors’
Rd warning: PlotDendrogram.Rd:37: missing link ‘plotDendroAndColors’
Rd warning: PlotDendrogram.Rd:43: missing link ‘plotDendroAndColors’
    PlotGraphWithModules                    html  
Rd warning: PlotGraphWithModules.Rd:41: missing link ‘ggnet2’
    RecallPrecision                         html  
    RobustCor                               html  
    SeqFDR                                  html  
    SimulateData                            html  
    SimulateData1P                          html  
    SimulateData2P                          html  
    SimulateData3P                          html  
    SimulateDataNP                          html  
    aSHD                                    html  
    data_GEUVADIS_combined                  html  
    data_examples                           html  
    data_with_outliers                      html  
Rd warning: data_with_outliers.Rd:8: missing link ‘pc’
Rd warning: data_with_outliers.Rd:8: missing link ‘pc.stable’
Rd warning: data_with_outliers.Rd:8: missing link ‘mmpc’
Rd warning: data_with_outliers.Rd:8: missing link ‘mmhc’
Rd warning: data_with_outliers.Rd:8: missing link ‘hc’
    data_without_outliers                   html  
Rd warning: data_without_outliers.Rd:8: missing link ‘pc’
Rd warning: data_without_outliers.Rd:8: missing link ‘pc.stable’
Rd warning: data_without_outliers.Rd:8: missing link ‘mmpc’
Rd warning: data_without_outliers.Rd:8: missing link ‘mmhc’
Rd warning: data_without_outliers.Rd:8: missing link ‘hc’
    empty                                   html  
    mpinv                                   html  
    seqDiff                                 html  
    simu_data_M0                            html  
    simu_data_M1                            html  
    simu_data_M2                            html  
    simu_data_M3                            html  
    simu_data_M4                            html  
    simu_data_layered                       html  
    simu_data_multiparent                   html  
    simu_data_starshaped                    html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (MRPC)