* installing to library ‘/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages’ * installing *source* package ‘MAGNAMWAR’ ... ** package ‘MAGNAMWAR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package ‘MAGNAMWAR’ finding HTML links ... done AnalyzeOrthoMCL html CalculatePrincipalCoordinates html FormatAfterOrtho html FormatMCLFastas html JoinRepSeq html ManhatGrp html PDGPlot html PDGvOG html PhyDataError html PrintOGSeqs html QQPlotter html RASTtoGBK html SurvAppendMatrix html WriteMCL html after_ortho_format html after_ortho_format_grps html joined_mtrx html joined_mtrx_grps html mcl_mtrx html mcl_mtrx_grps html pheno_data html starv_pheno_data html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MAGNAMWAR)